RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 DDTLA6NHG4 134 aaPredicted RBP15.37■□□□□ 0.05
USP48-213ENST00000529637 SFI1A8K8P3 1242 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 CHMP2AO43633 222 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 GNA14O95837 355 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 RARAP10276 462 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 ZCWPW2Q504Y3 356 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 SLC30A10Q6XR72 485 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 TAX1BP1Q86VP1 789 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 ZBTB10Q96DT7 871 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 NAP1L4Q99733 375 aaKnown RBP15.37■□□□□ 0.05
USP48-213ENST00000529637 FAM167BQ9BTA0 163 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 EDEM3Q9BZQ6 932 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 AZI2Q9H6S1 392 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 SLCO1A2P46721 670 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 ZNF268Q14587 947 aaPredicted RBP15.36■□□□□ 0.05
USP48-213ENST00000529637 CATSPER3Q86XQ3 398 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 GLG1Q92896 1179 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 RNF25Q96BH1 459 aaPredicted RBP15.36■□□□□ 0.05
USP48-213ENST00000529637 PBKQ96KB5 322 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 CEP63Q96MT8 703 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 HDAC9Q9UKV0 1011 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 F5H6K3 240 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 CLIC2O15247 247 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 TBCAO75347 108 aaKnown RBP15.36■□□□□ 0.05
USP48-213ENST00000529637 GCNT3O95395 438 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 NCALDP61601 193 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 KLRC3Q07444 240 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 RIPK1Q13546 671 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 CCDC38Q502W7 563 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 CAPRIN2Q6IMN6 1127 aaKnown RBP15.36■□□□□ 0.05
USP48-213ENST00000529637 FBXO11Q86XK2 927 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 TRIM59Q8IWR1 403 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 SLFN12Q8IYM2 578 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 SYN2Q92777 582 aaPredicted RBP15.36■□□□□ 0.05
USP48-213ENST00000529637 AMNQ9BXJ7 453 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 TXLNGYQ9BZA5 131 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 NUCKS1Q9H1E3 243 aaKnown RBP15.36■□□□□ 0.05
USP48-213ENST00000529637 BHMT2Q9H2M3 363 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 CNOT10Q9H9A5 744 aaKnown RBP15.36■□□□□ 0.05
USP48-213ENST00000529637 STK38LQ9Y2H1 464 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 PCDHB13Q9Y5F0 798 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 IGF2BP3O00425 579 aaKnown RBP eCLIP15.36■□□□□ 0.05
USP48-213ENST00000529637 MYBL1P10243 752 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 SLC9A1P19634 815 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 MMP13P45452 471 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 SARNPP82979 210 aaKnown RBP15.36■□□□□ 0.05
USP48-213ENST00000529637 MIS18BP1Q6P0N0 1132 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 TPCN2Q8NHX9 752 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 FMO2Q99518 471 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 GLT8D2Q9H1C3 349 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 DNAJC18Q9H819 358 aa15.36■□□□□ 0.05
USP48-213ENST00000529637 RSPH10B2B2RC85 870 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 ASAP2O43150 1006 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 SMNDC1O75940 238 aaKnown RBP eCLIP15.35■□□□□ 0.05
USP48-213ENST00000529637 KRT16P08779 473 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 RSPH10BP0C881 870 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 NQO1P15559 274 aaKnown RBP15.35■□□□□ 0.05
USP48-213ENST00000529637 POU5F1Q01860 360 aaKnown RBP15.35■□□□□ 0.05
USP48-213ENST00000529637 PEX26Q7Z412 305 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 IRF2BP2Q7Z5L9 587 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 DAAM2Q86T65 1068 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 CENPTQ96BT3 561 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 CALR3Q96L12 384 aaKnown RBP15.35■□□□□ 0.05
USP48-213ENST00000529637 REEP2Q9BRK0 252 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 SLC5A4Q9NY91 659 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 SUGT1Q9Y2Z0 365 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 CDK5RAP2Q96SN8 1893 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 AFF2P51816 1311 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 PPFIA2O75334 1257 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 FGGP02679 453 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 ABL2P42684 1182 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 LRRC14Q15048 493 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 THEMIS2Q5TEJ8 643 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 CYP2W1Q8TAV3 490 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 YIPF3Q9GZM5 350 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 RGL1Q9NZL6 768 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 AIPL1Q9NZN9 384 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 PI4KBQ9UBF8 816 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 PNMA3Q9UL41 463 aa15.35■□□□□ 0.05
USP48-213ENST00000529637 ATF5Q9Y2D1 282 aaPredicted RBP15.35■□□□□ 0.05
USP48-213ENST00000529637 KIF3CO14782 793 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 GSTA1P08263 222 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 XRCC5P13010 732 aaKnown RBP15.34■□□□□ 0.05
USP48-213ENST00000529637 UBXN2AP68543 259 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 SLC29A2Q14542 456 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 ITIH4Q14624 930 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 ARSHQ5FYA8 562 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 KCNV2Q8TDN2 545 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 PIGOQ8TEQ8 1089 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 SEC14L1Q92503 715 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 GANQ9H2C0 597 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 BCAS3Q9H6U6 928 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 ECT2Q9H8V3 914 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 ERVK-5Q9HDB9 667 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 INTS9Q9NV88 658 aaKnown RBP15.34■□□□□ 0.05
USP48-213ENST00000529637 NOP53Q9NZM5 478 aaKnown RBP15.34■□□□□ 0.05
USP48-213ENST00000529637 SAMD15Q9P1V8 674 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 NAGPAQ9UK23 515 aa15.34■□□□□ 0.05
USP48-213ENST00000529637 UTP11Q9Y3A2 253 aaKnown RBP15.34■□□□□ 0.05
USP48-213ENST00000529637 CES2O00748 559 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms