RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 SYNE4Q8N205 404 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 AGGF1Q8N302 714 aaeCLIP8.62□□□□□ -1.03
C11orf88-203ENST00000529167 FITM2Q8N6M3 262 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 BHMTQ93088 406 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 PGM2Q96G03 612 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 FSD1Q9BTV5 496 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 TTYH3Q9C0H2 523 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 EPB41L1Q9H4G0 881 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 NRDE2Q9H7Z3 1164 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 SUCLA2Q9P2R7 463 aaPredicted RBP8.62□□□□□ -1.03
C11orf88-203ENST00000529167 SERTAD1Q9UHV2 236 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 INTUQ9ULD6 942 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 SUN1O94901 812 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 PDGFRBP09619 1106 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 CPA3P15088 417 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 NEK2P51955 445 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 TTLL12Q14166 644 aaPredicted RBP8.61□□□□□ -1.03
C11orf88-203ENST00000529167 RCN2Q14257 317 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 CFAP157Q5JU67 520 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 EPHA10Q5JZY3 1008 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 ZNF507Q8TCN5 953 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 CTNNBL1Q8WYA6 563 aaPredicted RBP8.61□□□□□ -1.03
C11orf88-203ENST00000529167 INPP5DQ92835 1189 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 GSDMAQ96QA5 445 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 NUDCD1Q96RS6 583 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 HNRNPABQ99729 332 aaKnown RBP8.61□□□□□ -1.03
C11orf88-203ENST00000529167 CENPKQ9BS16 269 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 STOML1Q9UBI4 398 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 SERPINA10Q9UK55 444 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 KANSL1LA0AUZ9 987 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 MACROD2A1Z1Q3 448 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 AFPP02771 609 aaKnown RBP8.61□□□□□ -1.03
C11orf88-203ENST00000529167 CCNFP41002 786 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 EPS15P42566 896 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 MLLT3P42568 568 aaPredicted RBP8.61□□□□□ -1.03
C11orf88-203ENST00000529167 SERPINB8P50452 374 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 NUBP1P53384 320 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 GRM1Q13255 1194 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 TRADDQ15628 312 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 ADRM1Q16186 407 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 AKAP4Q5JQC9 854 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 ALDH16A1Q8IZ83 802 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 OLFM3Q96PB7 478 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 SRPK1Q96SB4 655 aaKnown RBP8.61□□□□□ -1.03
C11orf88-203ENST00000529167 CGREF1Q99674 301 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 SLC39A3Q9BRY0 314 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 SMARCAL1Q9NZC9 954 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 EHD2Q9NZN4 543 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 ARL2BPQ9Y2Y0 163 aa8.61□□□□□ -1.03
C11orf88-203ENST00000529167 FAM155AB1AL88 458 aaPredicted RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 ZNF263O14978 683 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 POLR2DO15514 142 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 PJA2O43164 708 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 CAMTA2O94983 1202 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 CELF2O95319 508 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 FGFR1OPO95684 399 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 LDHAP00338 332 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 PIM1P11309 404 aaPredicted RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 PTPREP23469 700 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 PIP4K2AP48426 406 aaPredicted RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 ACADVLP49748 655 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 CDK7P50613 346 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 EIF6P56537 245 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 DMPKQ09013 629 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 SAFBQ15424 915 aaKnown RBP eCLIP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 PKN2Q16513 984 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 SHROOM1Q2M3G4 852 aaPredicted RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 ZNF362Q5T0B9 420 aaPredicted RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 SMYD5Q6GMV2 418 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 NEPROQ6NW34 567 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 UNC13DQ70J99 1090 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 TMCO5AQ8N6Q1 288 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 MB21D1Q8N884 522 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 FAM13CQ8NE31 585 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 MYH10P35580 1976 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 MYPNQ86TC9 1320 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 AKAP11Q9UKA4 1901 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 CCDC162PA2VCL2 907 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 LYNP07948 512 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 IL6STP40189 918 aaPredicted RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 EMP3P54852 163 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 MTTPP55157 894 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 ACVR2BQ13705 512 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 SPIDRQ14159 915 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 RNF43Q68DV7 783 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 VPS37DQ86XT2 251 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 STK11IPQ8N1F8 1099 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 SUPT20HQ8NEM7 779 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 DQX1Q8TE96 717 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 NAT14Q8WUY8 206 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 VPS16Q9H269 839 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 ADARB2Q9NS39 739 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 RWDD2AQ9UIY3 292 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 HPS5Q9UPZ3 1129 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 RBBP6Q7Z6E9 1792 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 ASMTLO95671 621 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 HNRNPH3P31942 346 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 ADARP55265 1226 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 ERVK-9P63128 1117 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms