RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 TMX1Q9H3N1 280 aa13.49□□□□□ -0.25
SDHD-205ENST00000528048 ATP6V0A4Q9HBG4 840 aa13.49□□□□□ -0.25
SDHD-205ENST00000528048 RGS18Q9NS28 235 aa13.49□□□□□ -0.25
SDHD-205ENST00000528048 A0A087WWV3 80 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 LINC01553A4QN01 128 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 ARHGEF35A5YM69 484 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 MED24O75448 989 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 PDIA4P13667 645 aaKnown RBP13.48□□□□□ -0.25
SDHD-205ENST00000528048 SYT1P21579 422 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 SARSP49591 514 aaKnown RBP13.48□□□□□ -0.25
SDHD-205ENST00000528048 LAMTOR4Q0VGL1 99 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 BTG3Q14201 252 aaPredicted RBP13.48□□□□□ -0.25
SDHD-205ENST00000528048 ARL6IP4Q66PJ3 421 aaKnown RBP13.48□□□□□ -0.25
SDHD-205ENST00000528048 CATSPER4Q7RTX7 472 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 FERMT3Q86UX7 667 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 KSR1Q8IVT5 923 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 SNX29Q8TEQ0 813 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 CHST12Q9NRB3 414 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 DACT1Q9NYF0 836 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 DBR1Q9UK59 544 aaKnown RBP13.48□□□□□ -0.25
SDHD-205ENST00000528048 MTUS1Q9ULD2 1270 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 KIAA1024Q9UPX6 916 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 DNM3Q9UQ16 869 aa13.48□□□□□ -0.25
SDHD-205ENST00000528048 MYH7BA7E2Y1 1941 aa13.47□□□□□ -0.25
SDHD-205ENST00000528048 PHKA2P46019 1235 aa13.47□□□□□ -0.25
SDHD-205ENST00000528048 RARRES1P49788 294 aa13.47□□□□□ -0.25
SDHD-205ENST00000528048 ERVK-21P61565 698 aa13.47□□□□□ -0.25
SDHD-205ENST00000528048 ATP2C1P98194 919 aaPredicted RBP13.47□□□□□ -0.25
SDHD-205ENST00000528048 ZRSR1Q15695 479 aaKnown RBP13.47□□□□□ -0.25
SDHD-205ENST00000528048 MAEAQ7L5Y9 396 aa13.47□□□□□ -0.25
SDHD-205ENST00000528048 SRGAP1Q7Z6B7 1085 aa13.47□□□□□ -0.25
SDHD-205ENST00000528048 IGSF22Q8N9C0 903 aa13.47□□□□□ -0.25
SDHD-205ENST00000528048 MCPH1Q8NEM0 835 aa13.47□□□□□ -0.25
SDHD-205ENST00000528048 MAFAQ8NHW3 353 aaPredicted RBP13.47□□□□□ -0.25
SDHD-205ENST00000528048 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
SDHD-205ENST00000528048 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
SDHD-205ENST00000528048 VWA3AA6NCI4 1184 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 RBAK-RBAKDNI3L0D1 243 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 HOXA2O43364 376 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 USO1O60763 962 aaKnown RBP13.46□□□□□ -0.25
SDHD-205ENST00000528048 CSDE1O75534 798 aaKnown RBP13.46□□□□□ -0.25
SDHD-205ENST00000528048 DGKIO75912 1065 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 SKIP12755 728 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 FGFR4P22455 802 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 FAM189BP81408 668 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 FAM102BQ5T8I3 360 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 PADI6Q6TGC4 694 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 ABI1Q8IZP0 508 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 RNF149Q8NC42 400 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 RNF169Q8NCN4 708 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 FBXO22Q8NEZ5 403 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 LINC01599Q8WXQ3 324 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 PPM1EQ8WY54 764 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 HS3ST6Q96QI5 342 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 ELAC1Q9H777 363 aaKnown RBP13.46□□□□□ -0.25
SDHD-205ENST00000528048 DDX19AQ9NUU7 478 aaKnown RBP13.46□□□□□ -0.25
SDHD-205ENST00000528048 RWDD3Q9Y3V2 267 aa13.46□□□□□ -0.25
SDHD-205ENST00000528048 C9IYK1 514 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 RFXAPO00287 272 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 STX6O43752 255 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 MGEA5O60502 916 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 RB1P06400 928 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 ARL2P36404 184 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 UBA7P41226 1012 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 POU5F1BQ06416 359 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 DSC3Q14574 896 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 PCBP1Q15365 356 aaKnown RBP eCLIP13.45□□□□□ -0.26
SDHD-205ENST00000528048 SF3A1Q15459 793 aaKnown RBP13.45□□□□□ -0.26
SDHD-205ENST00000528048 SPOUT1Q5T280 376 aaKnown RBP13.45□□□□□ -0.26
SDHD-205ENST00000528048 TWF2Q6IBS0 349 aaKnown RBP13.45□□□□□ -0.26
SDHD-205ENST00000528048 TMEM192Q8IY95 271 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 CMTR2Q8IYT2 770 aaKnown RBP13.45□□□□□ -0.26
SDHD-205ENST00000528048 MICALL1Q8N3F8 863 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 KCTD17Q8N5Z5 321 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 RASSF8Q8NHQ8 419 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 AK8Q96MA6 479 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 POLR3FQ9H1D9 316 aaPredicted RBP13.45□□□□□ -0.26
SDHD-205ENST00000528048 BHMT2Q9H2M3 363 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 TMEM161AQ9NX61 479 aa13.45□□□□□ -0.26
SDHD-205ENST00000528048 PIN4Q9Y237 131 aaKnown RBP13.45□□□□□ -0.26
SDHD-205ENST00000528048 ADGRA3Q8IWK6 1321 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 INO80B-WBP1J3KQ70 363 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 ERLIN2O94905 339 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 ARHGEF15O94989 841 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 EOMESO95936 686 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 CYP11B2P19099 503 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 BMPR1AP36894 532 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 ADGRE1Q14246 886 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 CCDC85BQ15834 202 aaPredicted RBP13.44□□□□□ -0.26
SDHD-205ENST00000528048 IL17AQ16552 155 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 PTPROQ16827 1216 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 PAN2Q504Q3 1202 aaKnown RBP13.44□□□□□ -0.26
SDHD-205ENST00000528048 EPC2Q52LR7 807 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 SLC17A8Q8NDX2 589 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 ZNF689Q96CS4 500 aaPredicted RBP13.44□□□□□ -0.26
SDHD-205ENST00000528048 CALML4Q96GE6 196 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 IFT74Q96LB3 600 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 C17orf80Q9BSJ5 609 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 NT5C3AQ9H0P0 336 aa13.44□□□□□ -0.26
SDHD-205ENST00000528048 IFT122Q9HBG6 1241 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms