RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 BZW2Q9Y6E2 419 aaKnown RBP13.44□□□□□ -0.26
TSKU-203ENST00000527881 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 MYH2Q9UKX2 1941 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 PVALEFA0A1B0GWK0 134 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 CSF1RP07333 972 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 GSTA2P09210 222 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 EXOC3L4Q17RC7 722 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 CKAP2Q8WWK9 683 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 SCG3Q8WXD2 468 aaKnown RBP13.44□□□□□ -0.26
TSKU-203ENST00000527881 DENND2DQ9H6A0 471 aaPredicted RBP13.44□□□□□ -0.26
TSKU-203ENST00000527881 DCLRE1BQ9H816 532 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 BIN2Q9UBW5 565 aaPredicted RBP13.44□□□□□ -0.26
TSKU-203ENST00000527881 LMTK3Q96Q04 1460 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 POTEMA6NI47 508 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 CCNB1P14635 433 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 STRN3Q13033 797 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 DHX34Q14147 1143 aaKnown RBP13.43□□□□□ -0.26
TSKU-203ENST00000527881 HERC4Q5GLZ8 1057 aaPredicted RBP13.43□□□□□ -0.26
TSKU-203ENST00000527881 KRT79Q5XKE5 535 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 ZDHHC24Q6UX98 284 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 KIAA0825Q8IV33 1275 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 RASGEF1CQ8N431 466 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 MCUR1Q96AQ8 359 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 TXLNGYQ9BZA5 131 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 CPVLQ9H3G5 476 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 SUDS3Q9H7L9 328 aaPredicted RBP13.43□□□□□ -0.26
TSKU-203ENST00000527881 ETS2P15036 469 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 UCHL3P15374 230 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 GNAQP50148 359 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 MGAT5Q09328 741 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 BTNL9Q6UXG8 535 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 ADGRA1Q86SQ6 560 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 PROM2Q8N271 834 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 SLC35G2Q8TBE7 412 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 TRAPPC9Q96Q05 1148 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 LRMDAQ9H2I8 198 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 GALNT8Q9NY28 637 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 ASIC3Q9UHC3 531 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 CNOT7Q9UIV1 285 aaKnown RBP13.43□□□□□ -0.26
TSKU-203ENST00000527881 CAPN9O14815 690 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 GOLGA8HP0CJ92 632 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 SKIV2L2P42285 1042 aaKnown RBP13.43□□□□□ -0.26
TSKU-203ENST00000527881 KCNJ1P48048 391 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 IL9RQ01113 521 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 EVX2Q03828 476 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 DEUP1Q05D60 604 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 PARP6Q2NL67 630 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 RFX8Q6ZV50 586 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 HS2ST1Q7LGA3 356 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 SEC14L1Q92503 715 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 USP40Q9NVE5 1235 aa13.43□□□□□ -0.26
TSKU-203ENST00000527881 VPS41P49754 854 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 CDR2Q01850 454 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 CHRNA2Q15822 529 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 ACBD5Q5T8D3 534 aaPredicted RBP13.42□□□□□ -0.26
TSKU-203ENST00000527881 CCDC137Q6PK04 289 aaKnown RBP13.42□□□□□ -0.26
TSKU-203ENST00000527881 GLYCTKQ8IVS8 523 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 SCYL3Q8IZE3 742 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 HDAC9Q9UKV0 1011 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 STX8Q9UNK0 236 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 ARFGEF2Q9Y6D5 1785 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
TSKU-203ENST00000527881 PFASO15067 1338 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 PITPNM2Q9BZ72 1349 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 MAP3K7O43318 606 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 THAP12O43422 761 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 POLGP54098 1239 aaPredicted RBP13.42□□□□□ -0.26
TSKU-203ENST00000527881 MCL1Q07820 350 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
TSKU-203ENST00000527881 CALCRLQ16602 461 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 RNF43Q68DV7 783 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 OR52E8Q6IFG1 317 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 NEK8Q86SG6 692 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 VPS52Q8N1B4 723 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 PNMA1Q8ND90 353 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 MRRFQ96E11 262 aaKnown RBP13.42□□□□□ -0.26
TSKU-203ENST00000527881 GNA14O95837 355 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 LMNAP02545 664 aaKnown RBP13.42□□□□□ -0.26
TSKU-203ENST00000527881 NR2F2P24468 414 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 MARK3P27448 753 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 COASYQ13057 564 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 IRF2BP2Q7Z5L9 587 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 ORAI2Q96SN7 254 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 RAB34Q9BZG1 259 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 MMADHCQ9H3L0 296 aaPredicted RBP13.42□□□□□ -0.26
TSKU-203ENST00000527881 PREBQ9HCU5 417 aa13.42□□□□□ -0.26
TSKU-203ENST00000527881 DMAP1Q9NPF5 467 aaPredicted RBP13.42□□□□□ -0.26
TSKU-203ENST00000527881 MAGEA13PA6NCF6 341 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 SPAG7O75391 227 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 RARGP13631 454 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 GRB10Q13322 594 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 MTFR1Q15390 333 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 GJB7Q6PEY0 223 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 VSTM1Q6UX27 236 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 MYLK4Q86YV6 388 aaPredicted RBP13.41□□□□□ -0.26
TSKU-203ENST00000527881 VGLL2Q8N8G2 317 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 HES6Q96HZ4 224 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 ZNF333Q96JL9 665 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 CARD9Q9H257 536 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms