RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 BTLAQ7Z6A9 289 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 SESTD1Q86VW0 696 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 SUMF1Q8NBK3 374 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 MYRIPQ8NFW9 859 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 NETO1Q8TDF5 533 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 POF1BQ8WVV4 589 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 DHX38Q92620 1227 aaKnown RBP4.72□□□□□ -1.65
CHD7-205ENST00000527825 APBB2Q92870 758 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 MYO19Q96H55 970 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 CCDC17Q96LX7 622 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 NECTIN4Q96NY8 510 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 NUP88Q99567 741 aaPredicted RBP4.72□□□□□ -1.65
CHD7-205ENST00000527825 ALG1Q9BT22 464 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 KATNAL1Q9BW62 490 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 CRNKL1Q9BZJ0 848 aaKnown RBP4.72□□□□□ -1.65
CHD7-205ENST00000527825 KANSL2Q9H9L4 492 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 ERVK-5Q9HDB9 667 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 BRD7Q9NPI1 651 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 A1CFQ9NQ94 594 aaKnown RBP4.72□□□□□ -1.65
CHD7-205ENST00000527825 RNF146Q9NTX7 359 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 KLK14Q9P0G3 267 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 ADD3Q9UEY8 706 aaKnown RBP4.72□□□□□ -1.65
CHD7-205ENST00000527825 DBR1Q9UK59 544 aaKnown RBP4.72□□□□□ -1.65
CHD7-205ENST00000527825 RAB23Q9ULC3 237 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 PLAGL2Q9UPG8 496 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 SETXQ7Z333 2677 aaKnown RBP4.72□□□□□ -1.65
CHD7-205ENST00000527825 DNAH14Q0VDD8 3507 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 FASNP49327 2511 aaKnown RBP4.72□□□□□ -1.65
CHD7-205ENST00000527825 IL16Q14005 1332 aa4.72□□□□□ -1.65
CHD7-205ENST00000527825 ANKRD11Q6UB99 2663 aaPredicted RBP4.71□□□□□ -1.65
CHD7-205ENST00000527825 SPTBN2O15020 2390 aa4.71□□□□□ -1.65
CHD7-205ENST00000527825 GPR179Q6PRD1 2367 aa4.71□□□□□ -1.65
CHD7-205ENST00000527825 FNDC1Q4ZHG4 1894 aaPredicted RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 COL4A3Q01955 1670 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 C1QTNF9BB2RNN3 333 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 GOLGA6L22H0YM25 854 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 SLC30A4O14863 429 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 BAG4O95429 457 aaKnown RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 FURINP09958 794 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 TXNP10599 105 aaKnown RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 ALAS1P13196 640 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 HOXB8P17481 243 aaPredicted RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 CASTP20810 708 aaKnown RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 MTHFRP42898 656 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 CHRNA4P43681 627 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 HMGN5P82970 282 aaKnown RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 GABPAQ06546 454 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 RING1Q06587 406 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 TDGQ13569 410 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 C11orf91Q3C1V1 193 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 TKFCQ3LXA3 575 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 PLEKHG4Q58EX7 1191 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 COX20Q5RI15 118 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 ANKRD54Q6NXT1 300 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 NSMFQ6X4W1 530 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 PRR23BQ6ZRT6 265 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 CAPN12Q6ZSI9 719 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 SYT9Q86SS6 491 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 CD163Q86VB7 1156 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 C1orf210Q8IVY1 113 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 ZDHHC14Q8IZN3 488 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 LRRC47Q8N1G4 583 aaKnown RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 KLHL23Q8NBE8 558 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 SPPL3Q8TCT6 385 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 ANP32BQ92688 251 aaKnown RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 ACSF2Q96CM8 615 aaPredicted RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 TRIM11Q96F44 468 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 MKNK1Q9BUB5 465 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 USP44Q9H0E7 712 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 SLC38A10Q9HBR0 1119 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 HDAC6Q9UBN7 1215 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 CCDC39Q9UFE4 941 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 GTF2IRD1Q9UHL9 959 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 DMGDHQ9UI17 866 aaKnown RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 FEM1BQ9UK73 627 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 LRFN2Q9ULH4 789 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 SMG5Q9UPR3 1016 aaKnown RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 R3HCC1Q9Y3T6 440 aaKnown RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 DDX49Q9Y6V7 483 aaKnown RBP4.71□□□□□ -1.66
CHD7-205ENST00000527825 MYH6P13533 1939 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 C2orf16Q68DN1 1984 aa4.71□□□□□ -1.66
CHD7-205ENST00000527825 GREB1Q4ZG55 1949 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 GREB1LQ9C091 1923 aaPredicted RBP4.7□□□□□ -1.66
CHD7-205ENST00000527825 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.7□□□□□ -1.66
CHD7-205ENST00000527825 TMEM8BA6NDV4 472 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 B4DLN1 442 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 LAMTOR5O43504 91 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 ITGB1P05556 798 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 DCNP07585 359 aaKnown RBP4.7□□□□□ -1.66
CHD7-205ENST00000527825 C1QTNF9P0C862 333 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 NPR3P17342 541 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 DNAJB1P25685 340 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 PMLP29590 882 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 ALDH5A1P51649 535 aaPredicted RBP4.7□□□□□ -1.66
CHD7-205ENST00000527825 MRPL12P52815 198 aaKnown RBP4.7□□□□□ -1.66
CHD7-205ENST00000527825 MFAP1P55081 439 aaKnown RBP4.7□□□□□ -1.66
CHD7-205ENST00000527825 SHC2P98077 582 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 ITIH3Q06033 890 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 SLC20A2Q08357 652 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms