RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 INO80BQ9C086 356 aaPredicted RBP25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 USP15Q9Y4E8 981 aaPredicted RBP25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 NPY5RQ15761 445 aa25.12■■□□□ 1.61
TRAPPC4-208ENST00000527680 CLLU1OSQ5K130 101 aa25.12■■□□□ 1.61
TRAPPC4-208ENST00000527680 B3GNT9Q6UX72 402 aa25.12■■□□□ 1.61
TRAPPC4-208ENST00000527680 MBOAT7Q96N66 472 aa25.12■■□□□ 1.61
TRAPPC4-208ENST00000527680 NGRNQ9NPE2 291 aaKnown RBP25.12■■□□□ 1.61
TRAPPC4-208ENST00000527680 CHST12Q9NRB3 414 aa25.12■■□□□ 1.61
TRAPPC4-208ENST00000527680 FSCN2O14926 492 aa25.11■■□□□ 1.61
TRAPPC4-208ENST00000527680 SLC37A4O43826 429 aa25.11■■□□□ 1.61
TRAPPC4-208ENST00000527680 STBD1O95210 358 aa25.11■■□□□ 1.61
TRAPPC4-208ENST00000527680 SFPQP23246 707 aaKnown RBP eCLIP25.11■■□□□ 1.61
TRAPPC4-208ENST00000527680 CA8P35219 290 aa25.11■■□□□ 1.61
TRAPPC4-208ENST00000527680 ALDH7A1P49419 539 aaKnown RBP25.11■■□□□ 1.61
TRAPPC4-208ENST00000527680 SCRN1Q12765 414 aa25.11■■□□□ 1.61
TRAPPC4-208ENST00000527680 TWF2Q6IBS0 349 aaKnown RBP25.11■■□□□ 1.61
TRAPPC4-208ENST00000527680 LLGL2Q6P1M3 1020 aa25.11■■□□□ 1.61
TRAPPC4-208ENST00000527680 JPH2Q9BR39 696 aaPredicted RBP25.11■■□□□ 1.61
TRAPPC4-208ENST00000527680 PHF20Q9BVI0 1012 aa25.11■■□□□ 1.61
TRAPPC4-208ENST00000527680 IGKV6-21A0A0C4DH24 114 aa25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 CCNT1O60563 726 aaKnown RBP25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 DKC1O60832 514 aaKnown RBP eCLIP25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 MAFO75444 373 aaPredicted RBP25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 TECP42680 631 aa25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 QARSP47897 775 aaKnown RBP25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 LONRF3Q496Y0 759 aa25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 HERC4Q5GLZ8 1057 aaPredicted RBP25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 ANO5Q75V66 913 aa25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 NEK8Q86SG6 692 aa25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 RPGRIP1Q96KN7 1286 aa25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 FAM20AQ96MK3 541 aa25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 NLRP4Q96MN2 994 aa25.1■■□□□ 1.61
TRAPPC4-208ENST00000527680 HIDE1A8MVS5 230 aa25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 EML1O00423 815 aa25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 DTNBO60941 627 aa25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 BMS1Q14692 1282 aaKnown RBP25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 PLA2G4FQ68DD2 849 aa25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 PIK3AP1Q6ZUJ8 805 aa25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 CATSPER4Q7RTX7 472 aa25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 ZNF598Q86UK7 904 aaKnown RBP25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 ZNF410Q86VK4 478 aa25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 KSR1Q8IVT5 923 aa25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 VN1R2Q8NFZ6 395 aa25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 CEP89Q96ST8 783 aa25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 APOL5Q9BWW9 433 aa25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 PHF7Q9BWX1 381 aaPredicted RBP25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 MRPL9Q9BYD2 267 aaKnown RBP25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 PIN4Q9Y237 131 aaKnown RBP25.09■■□□□ 1.61
TRAPPC4-208ENST00000527680 NT5C1B-RDH14C9J2C7 533 aa25.08■■□□□ 1.61
TRAPPC4-208ENST00000527680 SKIP12755 728 aa25.08■■□□□ 1.61
TRAPPC4-208ENST00000527680 PHKA2P46019 1235 aa25.08■■□□□ 1.61
TRAPPC4-208ENST00000527680 TMEM87AQ8NBN3 555 aa25.08■■□□□ 1.61
TRAPPC4-208ENST00000527680 SLC7A3Q8WY07 619 aa25.08■■□□□ 1.61
TRAPPC4-208ENST00000527680 CEP170P1Q96L14 293 aa25.08■■□□□ 1.61
TRAPPC4-208ENST00000527680 CYP26B1Q9NR63 512 aa25.08■■□□□ 1.61
TRAPPC4-208ENST00000527680 GJB4Q9NTQ9 266 aa25.08■■□□□ 1.61
TRAPPC4-208ENST00000527680 TPCN1Q9ULQ1 816 aa25.08■■□□□ 1.61
TRAPPC4-208ENST00000527680 P4HBP07237 508 aaKnown RBP25.07■■□□□ 1.6
TRAPPC4-208ENST00000527680 GCFC2P16383 781 aaKnown RBP25.07■■□□□ 1.6
TRAPPC4-208ENST00000527680 NPEPPSP55786 919 aa25.07■■□□□ 1.6
TRAPPC4-208ENST00000527680 BCAR1P56945 870 aa25.07■■□□□ 1.6
TRAPPC4-208ENST00000527680 PPP2R5CQ13362 524 aa25.07■■□□□ 1.6
TRAPPC4-208ENST00000527680 PPP4R3AQ6IN85 833 aa25.07■■□□□ 1.6
TRAPPC4-208ENST00000527680 EXOC8Q8IYI6 725 aa25.07■■□□□ 1.6
TRAPPC4-208ENST00000527680 EDAQ92838 391 aa25.07■■□□□ 1.6
TRAPPC4-208ENST00000527680 LPPQ93052 612 aa25.07■■□□□ 1.6
TRAPPC4-208ENST00000527680 NAP1L4Q99733 375 aaKnown RBP25.07■■□□□ 1.6
TRAPPC4-208ENST00000527680 LOC730098B7Z3J9 87 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 PFKFB2O60825 505 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 BAG4O95429 457 aaKnown RBP25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 ATF7P17544 494 aaPredicted RBP25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 POLGP54098 1239 aaPredicted RBP25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 SMC1AQ14683 1233 aaKnown RBP25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 ANKRD54Q6NXT1 300 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 TMEM184AQ6ZMB5 413 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 HFE2Q6ZVN8 426 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 SLC39A11Q8N1S5 342 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 OXER1Q8TDS5 423 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 WASF1Q92558 559 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 TMEM169Q96HH4 297 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 MFSD14AQ96MC6 490 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 KCNMB3Q9NPA1 279 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 ORC3Q9UBD5 711 aaPredicted RBP25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 INPP5FQ9Y2H2 1132 aa25.06■■□□□ 1.6
TRAPPC4-208ENST00000527680 ZC3H11AO75152 810 aaKnown RBP eCLIP25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 CXCL14O95715 111 aa25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 SRGAP2CP0DJJ0 459 aa25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 RNASELQ05823 741 aaKnown RBP25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 ANKRD1Q15327 319 aa25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 GLB1LQ6UWU2 654 aa25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 OTUD6AQ7L8S5 288 aa25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 MRPL43Q8N983 215 aaKnown RBP25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 FAM105AQ9NUU6 356 aa25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 VAV3Q9UKW4 847 aa25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 COL4A3BPQ9Y5P4 624 aa25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 STK36Q9NRP7 1315 aa25.05■■□□□ 1.6
TRAPPC4-208ENST00000527680 CBX2Q14781 532 aaPredicted RBP25.04■■□□□ 1.6
TRAPPC4-208ENST00000527680 EPHA7Q15375 998 aa25.04■■□□□ 1.6
TRAPPC4-208ENST00000527680 NCAPH2Q6IBW4 605 aa25.04■■□□□ 1.6
TRAPPC4-208ENST00000527680 ZNF579Q8NAF0 562 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms