RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 SLC35C1Q96A29 364 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 HVCN1Q96D96 273 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 NTPCRQ9BSD7 190 aaKnown RBP17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 LZTFL1Q9NQ48 299 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 PDLIM7Q9NR12 457 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 GSTTP1A0A1W2PQM5 241 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 ASB14A6NK59 587 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 LRRC53A6NM62 1247 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 ZBTB48P10074 688 aaPredicted RBP17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 GNG11P61952 73 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 KRT83P78385 493 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 ARHGAP29Q52LW3 1261 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 ZNF526Q8TF50 670 aaPredicted RBP17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 BAP1Q92560 729 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 IFT74Q96LB3 600 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 NRBP2Q9NSY0 501 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 CASQ1P31415 396 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 STAT5BP51692 787 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 POLGP54098 1239 aaPredicted RBP17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 PPP2R5AQ15172 486 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 EXOC3L4Q17RC7 722 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 ERCC6LQ2NKX8 1250 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 TAF3Q5VWG9 929 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 SPRYD7Q5W111 196 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 PDXDC1Q6P996 788 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 C12orf56Q8IXR9 622 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 TMEM161BQ8NDZ6 487 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 MORC4Q8TE76 937 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 CCDC42Q96M95 316 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 TBX20Q9UMR3 447 aa17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 V9GYY5 206 aaPredicted RBP17.72■□□□□ 0.43
SNRNP35-204ENST00000527158 NOL4O94818 638 aa17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 ATP4AP20648 1035 aa17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 POLR2FP61218 127 aaKnown RBP17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 TUBB4BP68371 445 aa17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 TUBB2AQ13885 445 aa17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 GBP6Q6ZN66 633 aa17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 TUBB2BQ9BVA1 445 aa17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 NIFKQ9BYG3 293 aaKnown RBP17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 AZI2Q9H6S1 392 aa17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 NLRC4Q9NPP4 1024 aa17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 PLCB1Q9NQ66 1216 aa17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 DOCK5Q9H7D0 1870 aa17.71■□□□□ 0.43
SNRNP35-204ENST00000527158 DENND3A2RUS2 1198 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 GTPBP10A4D1E9 387 aaKnown RBP17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 H0YCG3 227 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 KIF5CO60282 957 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 URI1O94763 535 aaPredicted RBP17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 KRT13P13646 458 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 ABCD1P33897 745 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 TCF7P36402 384 aaPredicted RBP17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 AFAP1L1Q8TED9 768 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 SYN2Q92777 582 aaPredicted RBP17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 XPNPEP1Q9NQW7 623 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 EIF3CLB5ME19 914 aaKnown RBP17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 NOP56O00567 594 aaKnown RBP17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 STRNO43815 780 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 TADA3O75528 432 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 SOX10P56693 466 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 EMC2Q15006 297 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 CELF3Q5SZQ8 465 aaKnown RBP17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 SFMBT2Q5VUG0 894 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 FBXO16Q8IX29 292 aaPredicted RBP17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 XXYLT1Q8NBI6 393 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 SLC7A3Q8WY07 619 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 EIF3CQ99613 913 aaKnown RBP17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 POLR3FQ9H1D9 316 aaPredicted RBP17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 PCIF1Q9H4Z3 704 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 MORF4L1Q9UBU8 362 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 IVNS1ABPQ9Y6Y0 642 aa17.7■□□□□ 0.42
SNRNP35-204ENST00000527158 ARIH2O95376 493 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 TMCO3Q6UWJ1 677 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 INTS8Q75QN2 995 aaKnown RBP17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 MAP4K3Q8IVH8 894 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 DHX37Q8IY37 1157 aaKnown RBP17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 RDH13Q8NBN7 331 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 BSNDQ8WZ55 320 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 PCYT2Q99447 389 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 PARK7Q99497 189 aaKnown RBP17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 DEF6Q9H4E7 631 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 SLC9A1P19634 815 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 PON1P27169 355 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 RFC5P40937 340 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 BFSP1Q12934 665 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 TTLL4Q14679 1199 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 SPA17Q15506 151 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 ABRAQ8N0Z2 381 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 CBWD1Q9BRT8 395 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 KIFC3Q9BVG8 833 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 HSPBP1Q9NZL4 362 aa17.69■□□□□ 0.42
SNRNP35-204ENST00000527158 TXNP10599 105 aaKnown RBP17.68■□□□□ 0.42
SNRNP35-204ENST00000527158 ADORA2AP29274 412 aa17.68■□□□□ 0.42
SNRNP35-204ENST00000527158 GPR161Q8N6U8 529 aaKnown RBP17.68■□□□□ 0.42
SNRNP35-204ENST00000527158 GLG1Q92896 1179 aa17.68■□□□□ 0.42
SNRNP35-204ENST00000527158 FAM167AQ96KS9 214 aa17.68■□□□□ 0.42
SNRNP35-204ENST00000527158 GPR20Q99678 358 aa17.68■□□□□ 0.42
SNRNP35-204ENST00000527158 GANQ9H2C0 597 aa17.68■□□□□ 0.42
SNRNP35-204ENST00000527158 DHX33Q9H6R0 707 aaKnown RBP17.68■□□□□ 0.42
SNRNP35-204ENST00000527158 GCNT4Q9P109 453 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms