RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 REEP2Q9BRK0 252 aa18.45■□□□□ 0.54
SMCO4-204ENST00000527149 FDXACB1Q9BRP7 624 aaPredicted RBP18.45■□□□□ 0.54
SMCO4-204ENST00000527149 TIPINQ9BVW5 301 aa18.45■□□□□ 0.54
SMCO4-204ENST00000527149 CUEDC2Q9H467 287 aa18.45■□□□□ 0.54
SMCO4-204ENST00000527149 POLD4Q9HCU8 107 aa18.45■□□□□ 0.54
SMCO4-204ENST00000527149 KBTBD4Q9NVX7 518 aa18.45■□□□□ 0.54
SMCO4-204ENST00000527149 GINS2Q9Y248 185 aa18.45■□□□□ 0.54
SMCO4-204ENST00000527149 NOC2LQ9Y3T9 749 aaKnown RBP18.45■□□□□ 0.54
SMCO4-204ENST00000527149 ADGRA3Q8IWK6 1321 aa18.45■□□□□ 0.54
SMCO4-204ENST00000527149 MYMKA6NI61 221 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 ASAP2O43150 1006 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 CD52P31358 61 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 BMP8BP34820 402 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 ZNF131P52739 623 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 CDC42EP1Q00587 391 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 RAD51AP2Q09MP3 1159 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 C9orf50Q5SZB4 431 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 RASIP1Q5U651 963 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 CDCA2Q69YH5 1023 aaPredicted RBP18.44■□□□□ 0.54
SMCO4-204ENST00000527149 USP38Q8NB14 1042 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 RNF149Q8NC42 400 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 DBF4BQ8NFT6 615 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 NLRP7Q8WX94 980 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 NFKBIZQ9BYH8 718 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 MINDY3Q9H8M7 445 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 ERVK-5Q9HDB9 667 aa18.44■□□□□ 0.54
SMCO4-204ENST00000527149 GADD45BO75293 160 aaPredicted RBP18.43■□□□□ 0.54
SMCO4-204ENST00000527149 PTENP60484 403 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 CACNB1Q02641 598 aaPredicted RBP18.43■□□□□ 0.54
SMCO4-204ENST00000527149 POU5F1BQ06416 359 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 GIT2Q14161 759 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 CNKSR3Q6P9H4 555 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 PSRC1Q6PGN9 363 aaPredicted RBP18.43■□□□□ 0.54
SMCO4-204ENST00000527149 ZNF365Q70YC5 407 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 SV2BQ7L1I2 683 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 RPUSD2Q8IZ73 545 aaKnown RBP18.43■□□□□ 0.54
SMCO4-204ENST00000527149 LINC01599Q8WXQ3 324 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 DNAJC19Q96DA6 116 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 IFIH1Q9BYX4 1025 aaKnown RBP18.43■□□□□ 0.54
SMCO4-204ENST00000527149 TNMDQ9H2S6 317 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 TMX1Q9H3N1 280 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 ODF2LQ9ULJ1 636 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 PADI3Q9ULW8 664 aa18.43■□□□□ 0.54
SMCO4-204ENST00000527149 CHD9Q3L8U1 2897 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 CSDE1O75534 798 aaKnown RBP18.42■□□□□ 0.54
SMCO4-204ENST00000527149 SLFN14P0C7P3 912 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 SRGAP2CP0DJJ0 459 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 NAMPTP43490 491 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 CSPP1Q1MSJ5 1256 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 CNNM4Q6P4Q7 775 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 CHRDL2Q6WN34 429 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 ENGASEQ8NFI3 743 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 DRC1Q96MC2 740 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 SCLT1Q96NL6 688 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 PYM1Q9BRP8 204 aaKnown RBP18.42■□□□□ 0.54
SMCO4-204ENST00000527149 GCOM2Q9BZD3 368 aaPredicted RBP18.42■□□□□ 0.54
SMCO4-204ENST00000527149 MAGEF1Q9HAY2 307 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 SERTAD1Q9UHV2 236 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 TTC3P53804 2025 aa18.42■□□□□ 0.54
SMCO4-204ENST00000527149 FRMD3A2A2Y4 597 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 RPS6KA5O75582 802 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 FGFR4P22455 802 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 SYKP43405 635 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 PHKA2P46019 1235 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 NPTX2P47972 431 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 MBTD1Q05BQ5 628 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 PAK2Q13177 524 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 SNW1Q13573 536 aaKnown RBP18.41■□□□□ 0.54
SMCO4-204ENST00000527149 TFDP1Q14186 410 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 AMHR2Q16671 573 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 LONRF3Q496Y0 759 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 FMR1NBQ8N0W7 255 aaPredicted RBP18.41■□□□□ 0.54
SMCO4-204ENST00000527149 HERVK_113Q902F9 699 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 SEPT8Q92599 483 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 DDX12PQ92771 950 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 STAMQ92783 540 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 FIZ1Q96SL8 496 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 KIFC3Q9BVG8 833 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 TRIM9Q9C026 710 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 UBE2OQ9C0C9 1292 aaKnown RBP18.41■□□□□ 0.54
SMCO4-204ENST00000527149 C17orf75Q9HAS0 396 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 CXXC1Q9P0U4 656 aaPredicted RBP18.41■□□□□ 0.54
SMCO4-204ENST00000527149 ARHGAP28Q9P2N2 729 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 ST3GAL5Q9UNP4 418 aa18.41■□□□□ 0.54
SMCO4-204ENST00000527149 LRRIQ4A6NIV6 560 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 SFI1A8K8P3 1242 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 PLS3P13797 630 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 PPP2R5AQ15172 486 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 SHHQ15465 462 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 DYMQ7RTS9 669 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 SRGAP1Q7Z6B7 1085 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 SPIRE2Q8WWL2 714 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 APBB2Q92870 758 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 KCNN1Q92952 543 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 CCDC113Q9H0I3 377 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 USP25Q9UHP3 1055 aa18.4■□□□□ 0.54
SMCO4-204ENST00000527149 MGEA5O60502 916 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 BAIAP3O94812 1187 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 FGBP02675 491 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 EDN1P05305 212 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms