RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TARBP2Q15633 366 aaKnown RBP18.16■□□□□ 0.5
PTPRU-210ENST00000527027 UGCGQ16739 394 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 Q6ZUG5 572 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 RSPH1Q8WYR4 309 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 SLC5A5Q92911 643 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 BRF1Q92994 677 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 TMEM169Q96HH4 297 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 GCOM2Q9BZD3 368 aaPredicted RBP18.16■□□□□ 0.5
PTPRU-210ENST00000527027 MYH9P35579 1960 aaKnown RBP18.15■□□□□ 0.5
PTPRU-210ENST00000527027 H0Y858 1186 aa18.15■□□□□ 0.5
PTPRU-210ENST00000527027 GFRA3O60609 400 aa18.15■□□□□ 0.5
PTPRU-210ENST00000527027 CSDE1O75534 798 aaKnown RBP18.15■□□□□ 0.5
PTPRU-210ENST00000527027 BRD1O95696 1058 aa18.15■□□□□ 0.5
PTPRU-210ENST00000527027 CA8P35219 290 aa18.15■□□□□ 0.5
PTPRU-210ENST00000527027 VPS52Q8N1B4 723 aa18.15■□□□□ 0.5
PTPRU-210ENST00000527027 TMEM87AQ8NBN3 555 aa18.15■□□□□ 0.5
PTPRU-210ENST00000527027 PHKBQ93100 1093 aa18.15■□□□□ 0.5
PTPRU-210ENST00000527027 TRAIPQ9BWF2 469 aa18.15■□□□□ 0.5
PTPRU-210ENST00000527027 NIFKQ9BYG3 293 aaKnown RBP18.15■□□□□ 0.5
PTPRU-210ENST00000527027 CARNS1A5YM72 827 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 CHMP2AO43633 222 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 PHKA2P46019 1235 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 DNM2P50570 870 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 DRP2Q13474 957 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 NTRK3Q16288 839 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 XKR3Q5GH77 459 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 ATAT1Q5SQI0 421 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 LRCH2Q5VUJ6 765 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 CCDC148Q8NFR7 591 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 RDM1Q8NG50 284 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 TEKT3Q9BXF9 490 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 RNF26Q9BY78 433 aaPredicted RBP18.14■□□□□ 0.49
PTPRU-210ENST00000527027 UNC45AQ9H3U1 944 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 DZANK1Q9NVP4 752 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 IRAK3Q9Y616 596 aa18.14■□□□□ 0.49
PTPRU-210ENST00000527027 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.13■□□□□ 0.49
PTPRU-210ENST00000527027 GALR2O43603 387 aaPredicted RBP18.13■□□□□ 0.49
PTPRU-210ENST00000527027 ZC3H11AO75152 810 aaKnown RBP eCLIP18.13■□□□□ 0.49
PTPRU-210ENST00000527027 WEE2P0C1S8 567 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 SKIP12755 728 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 POLGP54098 1239 aaPredicted RBP18.13■□□□□ 0.49
PTPRU-210ENST00000527027 GIT2Q14161 759 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 MTERF2Q49AM1 385 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 RARS2Q5T160 578 aaKnown RBP18.13■□□□□ 0.49
PTPRU-210ENST00000527027 DDX53Q86TM3 631 aaKnown RBP18.13■□□□□ 0.49
PTPRU-210ENST00000527027 ZDHHC14Q8IZN3 488 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 PLCD3Q8N3E9 789 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 FBXL16Q8N461 479 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 C12orf76Q8N812 135 aaPredicted RBP18.13■□□□□ 0.49
PTPRU-210ENST00000527027 KCNB2Q92953 911 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 JAKMIP1Q96N16 626 aaKnown RBP18.13■□□□□ 0.49
PTPRU-210ENST00000527027 INO80BQ9C086 356 aaPredicted RBP18.13■□□□□ 0.49
PTPRU-210ENST00000527027 ZBP1Q9H171 429 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 VPS54Q9P1Q0 977 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 KMT2EQ8IZD2 1858 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 NID2Q14112 1375 aa18.13■□□□□ 0.49
PTPRU-210ENST00000527027 A0A087WZ62 844 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 IGKV6-21A0A0C4DH24 114 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 CDC45O75419 566 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 PSMD10O75832 226 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 CTSAP10619 480 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 IFNAR1P17181 557 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 SFPQP23246 707 aaKnown RBP eCLIP18.12■□□□□ 0.49
PTPRU-210ENST00000527027 Q4G0T1 1027 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 KIAA1841Q6NSI8 718 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 KANK3Q6NY19 840 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 BLOC1S2Q6QNY1 142 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 GLB1LQ6UWU2 654 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 MIER3Q7Z3K6 550 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 SKAP1Q86WV1 359 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 TMEM173Q86WV6 379 aaPredicted RBP18.12■□□□□ 0.49
PTPRU-210ENST00000527027 AUTS2Q8WXX7 1259 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 LPPQ93052 612 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 GJA10Q969M2 543 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 IGSF21Q96ID5 467 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 SNX27Q96L92 541 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 CEP89Q96ST8 783 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 FDXACB1Q9BRP7 624 aaPredicted RBP18.12■□□□□ 0.49
PTPRU-210ENST00000527027 SLC26A6Q9BXS9 759 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 SH3GLB2Q9NR46 395 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 LIMD1Q9UGP4 676 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 SEPT9Q9UHD8 586 aaPredicted RBP18.12■□□□□ 0.49
PTPRU-210ENST00000527027 USTQ9Y2C2 406 aa18.12■□□□□ 0.49
PTPRU-210ENST00000527027 PTPRZ1P23471 2315 aaPredicted RBP18.12■□□□□ 0.49
PTPRU-210ENST00000527027 PROB1E7EW31 1015 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 ZNF623O75123 536 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 STBD1O95210 358 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 GALTP07902 379 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 EPCAMP16422 314 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 LONRF3Q496Y0 759 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 NOMO2Q5JPE7 1267 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 TWF2Q6IBS0 349 aaKnown RBP18.11■□□□□ 0.49
PTPRU-210ENST00000527027 ZNF410Q86VK4 478 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 TDRD5Q8NAT2 981 aaKnown RBP18.11■□□□□ 0.49
PTPRU-210ENST00000527027 TBCKQ8TEA7 893 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 SLC22A17Q8WUG5 538 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 AGXT2Q9BYV1 514 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 C22orf23Q9BZE7 217 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 NRDE2Q9H7Z3 1164 aa18.11■□□□□ 0.49
PTPRU-210ENST00000527027 TBC1D13Q9NVG8 400 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms