RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CAPSQ13938 189 aa18.27■□□□□ 0.52
CAPN1-205ENST00000526954 TFDP1Q14186 410 aa18.27■□□□□ 0.52
CAPN1-205ENST00000526954 ZNF618Q5T7W0 954 aa18.27■□□□□ 0.52
CAPN1-205ENST00000526954 TRAF7Q6Q0C0 670 aa18.27■□□□□ 0.52
CAPN1-205ENST00000526954 KSR1Q8IVT5 923 aa18.27■□□□□ 0.52
CAPN1-205ENST00000526954 CCDC65Q8IXS2 484 aa18.27■□□□□ 0.52
CAPN1-205ENST00000526954 SPATA20Q8TB22 786 aa18.27■□□□□ 0.52
CAPN1-205ENST00000526954 NFKBIZQ9BYH8 718 aa18.27■□□□□ 0.52
CAPN1-205ENST00000526954 CELF4Q9BZC1 486 aaKnown RBP18.27■□□□□ 0.52
CAPN1-205ENST00000526954 HIPK3Q9H422 1215 aa18.27■□□□□ 0.52
CAPN1-205ENST00000526954 TANC1Q9C0D5 1861 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 IDEP14735 1019 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 SELPP16109 830 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 CRYBB1P53674 252 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-205ENST00000526954 PEX3P56589 373 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 TMEM62Q0P6H9 643 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 DMP1Q13316 513 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-205ENST00000526954 PNOCQ13519 176 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 SKOR2Q2VWA4 1001 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-205ENST00000526954 IFNLR1Q8IU57 520 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-205ENST00000526954 MYCT1Q8N699 235 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 RNF149Q8NC42 400 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 KCNN1Q92952 543 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 IFT122Q9HBG6 1241 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 TRPV2Q9Y5S1 764 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 CDY2AQ9Y6F7 541 aa18.26■□□□□ 0.51
CAPN1-205ENST00000526954 TRIM43BA6NCK2 446 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 SMC2O95347 1197 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 RPN1P04843 607 aaKnown RBP18.25■□□□□ 0.51
CAPN1-205ENST00000526954 SRGAP2CP0DJJ0 459 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 MAPTP10636 758 aaKnown RBP18.25■□□□□ 0.51
CAPN1-205ENST00000526954 SCP2P22307 547 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 NPTX2P47972 431 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 SARSP49591 514 aaKnown RBP18.25■□□□□ 0.51
CAPN1-205ENST00000526954 PTENP60484 403 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 COASYQ13057 564 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 KCNB1Q14721 858 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 KIZQ2M2Z5 673 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 KLHL40Q2TBA0 621 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 HERC4Q5GLZ8 1057 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-205ENST00000526954 ODR4Q5SWX8 454 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 CDCA2Q69YH5 1023 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-205ENST00000526954 LRRC8DQ7L1W4 858 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 SFR1Q86XK3 245 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 SLC17A8Q8NDX2 589 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 TRIM43Q96BQ3 446 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-205ENST00000526954 GSDMAQ96QA5 445 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 FIZ1Q96SL8 496 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 NUP62CLQ9H1M0 184 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 CDHR5Q9HBB8 845 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 OLFML3Q9NRN5 406 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 SQORQ9Y6N5 450 aa18.25■□□□□ 0.51
CAPN1-205ENST00000526954 A0A087WZ62 844 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 TRAK2O60296 914 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 EVI5O60447 810 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 PARNO95453 639 aaKnown RBP18.24■□□□□ 0.51
CAPN1-205ENST00000526954 TIMP1P01033 207 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 CTSHP09668 335 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 IQCF3P0C7M6 154 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 PHKA2P46019 1235 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 RGS19P49795 217 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 SMTNP53814 917 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 PSMD2Q13200 908 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 CAMK4Q16566 473 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 KMT5BQ4FZB7 885 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 NT5DC1Q5TFE4 455 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 SRGAP1Q7Z6B7 1085 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 NLRP7Q8WX94 980 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 NLRP4Q96MN2 994 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 FDXACB1Q9BRP7 624 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-205ENST00000526954 GCOM2Q9BZD3 368 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-205ENST00000526954 C2orf40Q9H1Z8 148 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 ST6GALNAC4Q9H4F1 302 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 ZHX3Q9H4I2 956 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 KMT5AQ9NQR1 393 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 ARHGAP28Q9P2N2 729 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 PCDHA5Q9Y5H7 936 aa18.24■□□□□ 0.51
CAPN1-205ENST00000526954 LRRIQ4A6NIV6 560 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 CCDC169A6NNP5 214 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 H0YCG3 227 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 RHOBTB3O94955 611 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 DARSP14868 501 aaKnown RBP18.23■□□□□ 0.51
CAPN1-205ENST00000526954 EIF4BP23588 611 aaKnown RBP18.23■□□□□ 0.51
CAPN1-205ENST00000526954 CYP2C18P33260 490 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 EFNA5P52803 228 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 NCKAP1LP55160 1127 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 FAM178BQ8IXR5 827 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 C7orf61Q8IZ16 206 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 USP38Q8NB14 1042 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 SMARCE1Q969G3 411 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 CCDC47Q96A33 483 aaKnown RBP18.23■□□□□ 0.51
CAPN1-205ENST00000526954 ZNF668Q96K58 619 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-205ENST00000526954 PPP1R16BQ96T49 567 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 OSMRQ99650 979 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 INO80BQ9C086 356 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-205ENST00000526954 WNT8AQ9H1J5 351 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 PRDM5Q9NQX1 630 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-205ENST00000526954 UMODL1Q5DID0 1318 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 PHLPP2Q6ZVD8 1323 aa18.23■□□□□ 0.51
CAPN1-205ENST00000526954 ADGRA3Q8IWK6 1321 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms