RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 SPOCD1Q6ZMY3 1216 aa6.56□□□□□ -1.36
SF3B2-205ENST00000526653 PRR23BQ6ZRT6 265 aa6.56□□□□□ -1.36
SF3B2-205ENST00000526653 MAPKAPK5Q8IW41 473 aa6.56□□□□□ -1.36
SF3B2-205ENST00000526653 MRPL41Q8IXM3 137 aaKnown RBP6.56□□□□□ -1.36
SF3B2-205ENST00000526653 BHLHE22Q8NFJ8 381 aaPredicted RBP6.56□□□□□ -1.36
SF3B2-205ENST00000526653 TGFBRAP1Q8WUH2 860 aa6.56□□□□□ -1.36
SF3B2-205ENST00000526653 GLT1D1Q96MS3 346 aa6.56□□□□□ -1.36
SF3B2-205ENST00000526653 TINF2Q9BSI4 451 aa6.56□□□□□ -1.36
SF3B2-205ENST00000526653 SPATC1LQ9H0A9 340 aa6.56□□□□□ -1.36
SF3B2-205ENST00000526653 KCNH6Q9H252 994 aa6.56□□□□□ -1.36
SF3B2-205ENST00000526653 DHX36Q9H2U1 1008 aaKnown RBP6.56□□□□□ -1.36
SF3B2-205ENST00000526653 RPAP3Q9H6T3 665 aaPredicted RBP6.56□□□□□ -1.36
SF3B2-205ENST00000526653 RAI14Q9P0K7 980 aa6.56□□□□□ -1.36
SF3B2-205ENST00000526653 ZSWIM5Q9P217 1185 aa6.56□□□□□ -1.36
SF3B2-205ENST00000526653 SAP30BPQ9UHR5 308 aaKnown RBP6.56□□□□□ -1.36
SF3B2-205ENST00000526653 MYH3P11055 1940 aa6.56□□□□□ -1.36
SF3B2-205ENST00000526653 LTBP2Q14767 1821 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 UMODL1Q5DID0 1318 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 MYADML2A6NDP7 307 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 ARVCFO00192 962 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 TLR3O15455 904 aaKnown RBP6.55□□□□□ -1.36
SF3B2-205ENST00000526653 DCXO43602 365 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 PGRP06401 933 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 ASGR1P07306 291 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 FCER1AP12319 257 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 IL9P15248 144 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 VCAM1P19320 739 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 TFE3P19532 575 aaPredicted RBP6.55□□□□□ -1.36
SF3B2-205ENST00000526653 KCNA5P22460 613 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 KIR3DL1P43629 444 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 GSTO1P78417 241 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 EXOSC9Q06265 439 aaKnown RBP6.55□□□□□ -1.36
SF3B2-205ENST00000526653 GRB10Q13322 594 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 CCDC27Q2M243 656 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 MEI1Q5TIA1 1274 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 CCSAPQ6IQ19 270 aaPredicted RBP6.55□□□□□ -1.36
SF3B2-205ENST00000526653 MPZL3Q6UWV2 235 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 LBX2Q6XYB7 198 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 RPUSD2Q8IZ73 545 aaKnown RBP6.55□□□□□ -1.36
SF3B2-205ENST00000526653 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.55□□□□□ -1.36
SF3B2-205ENST00000526653 TMEM87BQ96K49 555 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 COX4I2Q96KJ9 171 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 ALPK1Q96QP1 1244 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 MIR1-1HGQ9H1L0 117 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 HIPK3Q9H422 1215 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 DNAJC18Q9H819 358 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 FAM184BQ9ULE4 1060 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 RFX7Q2KHR2 1363 aa6.55□□□□□ -1.36
SF3B2-205ENST00000526653 ELP1O95163 1332 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 C5orf42Q9H799 3197 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.54□□□□□ -1.36
SF3B2-205ENST00000526653 C6orf222P0C671 652 aaPredicted RBP6.54□□□□□ -1.36
SF3B2-205ENST00000526653 AKR1A1P14550 325 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 RFX5P48382 616 aaPredicted RBP6.54□□□□□ -1.36
SF3B2-205ENST00000526653 USP14P54578 494 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 TAP1Q03518 808 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 SLC6A19Q695T7 634 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 DEFB128Q7Z7B8 93 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 CILP2Q8IUL8 1156 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 FAM126BQ8IXS8 530 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 KLHDC9Q8NEP7 349 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 NSUN4Q96CB9 384 aaKnown RBP6.54□□□□□ -1.36
SF3B2-205ENST00000526653 SCLYQ96I15 445 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 C12orf42Q96LP6 360 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 NOL10Q9BSC4 688 aaKnown RBP6.54□□□□□ -1.36
SF3B2-205ENST00000526653 TRAIPQ9BWF2 469 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 TANGO6Q9C0B7 1094 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 KIAA1683Q9H0B3 1180 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 TRPV6Q9H1D0 765 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 MROH8Q9H579 483 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 GINM1Q9NU53 330 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 FAM86C1Q9NVL1 165 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 AATFQ9NY61 560 aaKnown RBP eCLIP6.54□□□□□ -1.36
SF3B2-205ENST00000526653 SLAMF8Q9P0V8 285 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 LRP2BPQ9P2M1 347 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 CNPY2Q9Y2B0 182 aa6.54□□□□□ -1.36
SF3B2-205ENST00000526653 PLXNA1Q9UIW2 1896 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 MROH7Q68CQ1 1323 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 SYNRGQ9UMZ2 1314 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 ANKRD33BA6NCL7 494 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 MAP4K4O95819 1239 aaPredicted RBP6.53□□□□□ -1.36
SF3B2-205ENST00000526653 CD4P01730 458 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 RAP1GAPP47736 663 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 TSNAXIP1Q2TAA8 658 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 LEXMQ3ZCV2 418 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 FBLN7Q53RD9 439 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 LCE4AQ5TA78 99 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 EP400NLQ6ZTU2 488 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 METTL16Q86W50 562 aaKnown RBP6.53□□□□□ -1.36
SF3B2-205ENST00000526653 ABRAQ8N0Z2 381 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 PCSK9Q8NBP7 692 aaKnown RBP6.53□□□□□ -1.36
SF3B2-205ENST00000526653 SHCBP1Q8NEM2 672 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 PRSS33Q8NF86 280 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 CCDC120Q96HB5 630 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 NEUROD6Q96NK8 337 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 MMP19Q99542 508 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 USP44Q9H0E7 712 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 UBE2ZQ9H832 354 aaPredicted RBP6.53□□□□□ -1.36
SF3B2-205ENST00000526653 HMG20BQ9P0W2 317 aa6.53□□□□□ -1.36
SF3B2-205ENST00000526653 NRBP1Q9UHY1 535 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms