RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 SPDYE5A6NIY4 337 aa10.03□□□□□ -0.8
CTNND1-213ENST00000526357 HUS1O60921 280 aa10.03□□□□□ -0.8
CTNND1-213ENST00000526357 MMP1P03956 469 aa10.03□□□□□ -0.8
CTNND1-213ENST00000526357 S100A5P33763 92 aa10.03□□□□□ -0.8
CTNND1-213ENST00000526357 IREB2P48200 963 aaKnown RBP10.03□□□□□ -0.8
CTNND1-213ENST00000526357 RAD51Q06609 339 aa10.03□□□□□ -0.8
CTNND1-213ENST00000526357 SPDYE7PQ495Y7 208 aa10.03□□□□□ -0.8
CTNND1-213ENST00000526357 CDKL3Q8IVW4 592 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-213ENST00000526357 GPT2Q8TD30 523 aa10.03□□□□□ -0.8
CTNND1-213ENST00000526357 FAM167AQ96KS9 214 aa10.03□□□□□ -0.8
CTNND1-213ENST00000526357 DDX56Q9NY93 547 aaKnown RBP10.03□□□□□ -0.8
CTNND1-213ENST00000526357 MPP6Q9NZW5 540 aa10.03□□□□□ -0.8
CTNND1-213ENST00000526357 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-213ENST00000526357 ZMYM4Q5VZL5 1548 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 C16orf96A6NNT2 1141 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 C5orf58C9J3I9 102 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 MAGEA9P43362 315 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 AP1B1Q10567 949 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 NBPF20Q3BBV1 942 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 DEPDC1Q5TB30 811 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 PKN3Q6P5Z2 889 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 ALKBH5Q6P6C2 394 aaKnown RBP10.02□□□□□ -0.8
CTNND1-213ENST00000526357 BEST2Q8NFU1 509 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 THOC1Q96FV9 657 aaKnown RBP10.02□□□□□ -0.8
CTNND1-213ENST00000526357 FAM161BQ96MY7 647 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 ECT2Q9H8V3 914 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 DYRK4Q9NR20 520 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 CLCA2Q9UQC9 943 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 TRAF3IP3Q9Y228 551 aa10.02□□□□□ -0.8
CTNND1-213ENST00000526357 CLRN2A0PK11 232 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 GOLGA8IPA6NC78 632 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 GOLGA8JA6NMD2 632 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 PDHA1P08559 390 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 CAPZA2P47755 286 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 PMS2P54278 862 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 GPC5P78333 572 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 DCAF4L1Q3SXM0 396 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 THEMIS2Q5TEJ8 643 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 SSH3Q8TE77 659 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 EEF2KMTQ96G04 330 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 TRIM62Q9BVG3 475 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 AFF4Q9UHB7 1163 aaKnown RBP10.02□□□□□ -0.81
CTNND1-213ENST00000526357 RAPGEF6Q8TEU7 1601 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 KRT16P08779 473 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 C16orf72Q14CZ0 275 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 CC2D2BQ6DHV5 1058 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 APOA5Q6Q788 366 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 PLD3Q8IV08 490 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 ENAHQ8N8S7 591 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-213ENST00000526357 NLRP4Q96MN2 994 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 YIPF3Q9GZM5 350 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.81
CTNND1-213ENST00000526357 ANAPC7Q9UJX3 599 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 STAP1Q9ULZ2 295 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 TARSL2A2RTX5 802 aaKnown RBP10.02□□□□□ -0.81
CTNND1-213ENST00000526357 UBXN8O00124 270 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 PRPF3O43395 683 aaKnown RBP10.02□□□□□ -0.81
CTNND1-213ENST00000526357 SUPT3HO75486 399 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 MYBL1P10243 752 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 GPC3P51654 580 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 BEND6Q5SZJ8 279 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-213ENST00000526357 NUDT18Q6ZVK8 323 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 RASGRP4Q8TDF6 673 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 FAM129AQ9BZQ8 928 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 CNOT8Q9UFF9 292 aaKnown RBP10.02□□□□□ -0.81
CTNND1-213ENST00000526357 NRBP1Q9UHY1 535 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 PNMA3Q9UL41 463 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 UBE4BO95155 1302 aa10.02□□□□□ -0.81
CTNND1-213ENST00000526357 IMPDH2P12268 514 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 HEATR6Q6AI08 1181 aaKnown RBP10.01□□□□□ -0.81
CTNND1-213ENST00000526357 NLGN1Q8N2Q7 840 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 STAMBPL1Q96FJ0 436 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 PAGE5Q96GU1 130 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 GOLPH3LQ9H4A5 285 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 GPR108Q9NPR9 543 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 CEP72Q9P209 647 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 NFKBIL1Q9UBC1 381 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-213ENST00000526357 IP6K2Q9UHH9 426 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 GUCA1CO95843 209 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 SLC16A2P36021 539 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 SERPINB4P48594 390 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 PRAMEP78395 509 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 ZNF496Q96IT1 587 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-213ENST00000526357 DDX50Q9BQ39 737 aaKnown RBP10.01□□□□□ -0.81
CTNND1-213ENST00000526357 SRPRBQ9Y5M8 271 aaKnown RBP10.01□□□□□ -0.81
CTNND1-213ENST00000526357 CFAP73A6NFT4 308 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 PLCG1P19174 1290 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 CLCN6P51797 869 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 ROR1Q01973 937 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 DPCR1Q3MIW9 517 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 SCN4BQ8IWT1 228 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 CNPY4Q8N129 248 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 TTC39CQ8N584 583 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 OSBPL10Q9BXB5 764 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 LSG1Q9H089 658 aaKnown RBP10.01□□□□□ -0.81
CTNND1-213ENST00000526357 ZNF556Q9HAH1 456 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 H2AFY2Q9P0M6 372 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-213ENST00000526357 DNAJC12Q9UKB3 198 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 HEY1Q9Y5J3 304 aa10.01□□□□□ -0.81
CTNND1-213ENST00000526357 PNMA6FA0A0J9YX94 578 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms