RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PTTG1IPP53801 180 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 MTERF2Q49AM1 385 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 GAGE13Q4V321 117 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 KRT40Q6A162 431 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 MFSD5Q6N075 450 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 SLC43A3Q8NBI5 491 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 CPT1CQ8TCG5 803 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 NKD2Q969F2 451 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 ARL8AQ96BM9 186 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 EXOC2Q96KP1 924 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 GMLQ99445 158 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 ZNF768Q9H5H4 540 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 NCDNQ9UBB6 729 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 SLC12A8A0AV02 714 aa4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 STC2O76061 302 aa4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 IPO13O94829 963 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 HK1P19367 917 aa4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 TIGD2Q4W5G0 525 aa4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 PLEKHG4Q58EX7 1191 aa4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 NAIF1Q69YI7 327 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 CLEC14AQ86T13 490 aa4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 MAGEB10Q96LZ2 347 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 FOXB1Q99853 325 aa4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 PRDM13Q9H4Q3 707 aa4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 CYP4F11Q9HBI6 524 aa4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 PPP1R1BQ9UD71 204 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 NDOR1Q9UHB4 597 aa4.39□□□□□ -1.71
ECHDC1-219ENST00000526299 A0A0A6YYK5 440 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 CENPVL1A0A0U1RR11 272 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 INO80B-WBP1J3KQ70 363 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 DIAPH1O60610 1272 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 LPXNO60711 386 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 HIP1RO75146 1068 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 ERBB2P04626 1255 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 SLC6A3Q01959 620 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 DGKDQ16760 1214 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 OVCH1Q7RTY7 1134 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 RD3Q7Z3Z2 195 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 C2orf69Q8N8R5 385 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 ST8SIA2Q92186 375 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 INO80BQ9C086 356 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 R3HDMLQ9H3Y0 253 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 DNAI1Q9UI46 699 aa4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 MRPS23Q9Y3D9 190 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-219ENST00000526299 STK10O94804 968 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 SCAF4O95104 1147 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 PRLP01236 227 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 JUNP05412 331 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 RASGRF1Q13972 1273 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 SPIDRQ14159 915 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 PAPD7Q5XG87 772 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 Q6YL49 198 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 LRP10Q7Z4F1 713 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 CKAP2LQ8IYA6 745 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 CELF4Q9BZC1 486 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 CCDC113Q9H0I3 377 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 SLC52A2Q9HAB3 445 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 SFMBT1Q9UHJ3 866 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 MSRB2Q9Y3D2 182 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 COX11Q9Y6N1 276 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 KDM2BQ8NHM5 1336 aa4.37□□□□□ -1.71
ECHDC1-219ENST00000526299 DAPK3O43293 454 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 EFCAB14O75071 495 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 PPFIA4O75335 1185 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 KRT37O76014 449 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 ZBTB48P10074 688 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 HNRNPLP14866 589 aaKnown RBP eCLIP4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 LAG3P18627 525 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 GNAT2P19087 354 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 ZEB1P37275 1124 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 NPEPPSP55786 919 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 IRF9Q00978 393 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 ROM1Q03395 351 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 FAM214AQ32MH5 1076 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 DCAF17Q5H9S7 520 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 BHLHA9Q7RTU4 235 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 CMTM4Q8IZR5 234 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 SLC7A14Q8TBB6 771 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 DYDC2Q96IM9 177 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 WDR92Q96MX6 357 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 FAM193BQ96PV7 902 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 ANKFY1Q9P2R3 1169 aa4.36□□□□□ -1.71
ECHDC1-219ENST00000526299 AHRRA9YTQ3 701 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 RECQL4O94761 1208 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 CDK4P11802 303 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 KCNA6P17658 529 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 FAM189BP81408 668 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 CC2D1AQ6P1N0 951 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 IGSF22Q8N9C0 903 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 SUPT20HQ8NEM7 779 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 E2F7Q96AV8 911 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 MYEOVQ96EZ4 313 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 MAML3Q96JK9 1138 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 C16orf92Q96LL3 132 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 WDR11Q9BZH6 1224 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 SERHL2Q9H4I8 314 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 RSAD1Q9HA92 442 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 POLR3BQ9NW08 1133 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms