RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 TBX3O15119 743 aa13.5□□□□□ -0.25
SSBP3-210ENST00000525990 MARCH6O60337 910 aa13.5□□□□□ -0.25
SSBP3-210ENST00000525990 GLP2RO95838 553 aa13.5□□□□□ -0.25
SSBP3-210ENST00000525990 P4HBP07237 508 aaKnown RBP13.5□□□□□ -0.25
SSBP3-210ENST00000525990 ZSCAN20P17040 1043 aaPredicted RBP13.5□□□□□ -0.25
SSBP3-210ENST00000525990 NRIP1P48552 1158 aa13.5□□□□□ -0.25
SSBP3-210ENST00000525990 EPHA7Q15375 998 aa13.5□□□□□ -0.25
SSBP3-210ENST00000525990 ZNF598Q86UK7 904 aaKnown RBP13.5□□□□□ -0.25
SSBP3-210ENST00000525990 THNSL1Q8IYQ7 743 aa13.5□□□□□ -0.25
SSBP3-210ENST00000525990 CEP170P1Q96L14 293 aa13.5□□□□□ -0.25
SSBP3-210ENST00000525990 GCOM2Q9BZD3 368 aaPredicted RBP13.5□□□□□ -0.25
SSBP3-210ENST00000525990 TMEM117Q9H0C3 514 aa13.5□□□□□ -0.25
SSBP3-210ENST00000525990 TMEM60Q9H2L4 133 aa13.5□□□□□ -0.25
SSBP3-210ENST00000525990 DHX33Q9H6R0 707 aaKnown RBP13.5□□□□□ -0.25
SSBP3-210ENST00000525990 MINDY3Q9H8M7 445 aa13.5□□□□□ -0.25
SSBP3-210ENST00000525990 IFT122Q9HBG6 1241 aa13.5□□□□□ -0.25
SSBP3-210ENST00000525990 A0A0U1RQF3 1178 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 FAM86C2PA6NEL3 165 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 POTEMA6NI47 508 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 SLITRK3O94933 977 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 CENPBP07199 599 aaPredicted RBP13.49□□□□□ -0.25
SSBP3-210ENST00000525990 ATP2B1P20020 1258 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 YWHABP31946 246 aaKnown RBP13.49□□□□□ -0.25
SSBP3-210ENST00000525990 DNM2P50570 870 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 POLGP54098 1239 aaPredicted RBP13.49□□□□□ -0.25
SSBP3-210ENST00000525990 ADAM15Q13444 863 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 CALCRLQ16602 461 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 NAALADL2Q58DX5 795 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 TPH2Q8IWU9 490 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 C4orf19Q8IY42 314 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 VN1R2Q8NFZ6 395 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 EIF2AK1Q9BQI3 630 aaKnown RBP13.49□□□□□ -0.25
SSBP3-210ENST00000525990 BRMS1Q9HCU9 246 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 C11orf16Q9NQ32 467 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 XPNPEP1Q9NQW7 623 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 CLEC1BQ9P126 229 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 BARX2Q9UMQ3 279 aaPredicted RBP13.49□□□□□ -0.25
SSBP3-210ENST00000525990 PIN4Q9Y237 131 aaKnown RBP13.49□□□□□ -0.25
SSBP3-210ENST00000525990 PCDHB12Q9Y5F1 795 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 COL4A3BPQ9Y5P4 624 aa13.49□□□□□ -0.25
SSBP3-210ENST00000525990 NT5C1B-RDH14C9J2C7 533 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 MBTPS2O43462 519 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 B4GALT3O60512 393 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 NEMFO60524 1076 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 SRGAP2CP0DJJ0 459 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 COL9A1P20849 921 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 TXKP42681 527 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 PHKA2P46019 1235 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 NDUFV1P49821 464 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 EMC2Q15006 297 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 XKR9Q5GH70 373 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 PLPP4Q5VZY2 271 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 TWF2Q6IBS0 349 aaKnown RBP13.48□□□□□ -0.25
SSBP3-210ENST00000525990 KCNT2Q6UVM3 1135 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 ZNF410Q86VK4 478 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 SLFN12Q8IYM2 578 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 GJD3Q8N144 294 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 LRRC43Q8N309 656 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 PRPF31Q8WWY3 499 aaKnown RBP13.48□□□□□ -0.25
SSBP3-210ENST00000525990 SLC7A3Q8WY07 619 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 NAP1L4Q99733 375 aaKnown RBP13.48□□□□□ -0.25
SSBP3-210ENST00000525990 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
SSBP3-210ENST00000525990 TLR9Q9NR96 1032 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 LIMCH1Q9UPQ0 1083 aa13.48□□□□□ -0.25
SSBP3-210ENST00000525990 FSCN2O14926 492 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 BAG4O95429 457 aaKnown RBP13.47□□□□□ -0.25
SSBP3-210ENST00000525990 LAG3P18627 525 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 SFPQP23246 707 aaKnown RBP eCLIP13.47□□□□□ -0.25
SSBP3-210ENST00000525990 SSTR3P32745 418 aaPredicted RBP13.47□□□□□ -0.25
SSBP3-210ENST00000525990 MCM7P33993 719 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 AFF1P51825 1210 aaKnown RBP13.47□□□□□ -0.25
SSBP3-210ENST00000525990 ZP2Q05996 745 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 LAMTOR4Q0VGL1 99 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 TRIM29Q14134 588 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 CATSPER4Q7RTX7 472 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 TMEM173Q86WV6 379 aaPredicted RBP13.47□□□□□ -0.25
SSBP3-210ENST00000525990 ABI1Q8IZP0 508 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 MICAL1Q8TDZ2 1067 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 PIGOQ8TEQ8 1089 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 MSLNLQ96KJ4 702 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 MTMR9Q96QG7 549 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 PCDHA12Q9UN75 941 aa13.47□□□□□ -0.25
SSBP3-210ENST00000525990 HIDE1A8MVS5 230 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 NBR1Q14596 966 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 FERMT3Q86UX7 667 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 ZNF710Q8N1W2 664 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 EFHBQ8N7U6 833 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 RNF149Q8NC42 400 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 ASAP3Q8TDY4 903 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 BCL7CQ8WUZ0 217 aaPredicted RBP13.46□□□□□ -0.25
SSBP3-210ENST00000525990 PSPC1Q8WXF1 523 aaKnown RBP13.46□□□□□ -0.25
SSBP3-210ENST00000525990 MRPS27Q92552 414 aaKnown RBP13.46□□□□□ -0.25
SSBP3-210ENST00000525990 ZNF558Q96NG5 402 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 HSD17B14Q9BPX1 270 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 ZSWIM4Q9H7M6 989 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 AAASQ9NRG9 546 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 AGPAT5Q9NUQ2 364 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 FAM105AQ9NUU6 356 aa13.46□□□□□ -0.25
SSBP3-210ENST00000525990 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
SSBP3-210ENST00000525990 DACT1Q9NYF0 836 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms