RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CYP2C19P33261 490 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 GPR3P46089 330 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 EPHA5P54756 1037 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 EPHB4P54760 987 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 GTF2H3Q13889 308 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 MINDY4Q4G0A6 757 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 NOSTRINQ8IVI9 506 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 CMIPQ8IY22 773 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 LMBR1Q8WVP7 490 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 MBD6Q96DN6 1003 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 AIFM3Q96NN9 605 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 TMEM209Q96SK2 561 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 ORAI2Q96SN7 254 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 TMEM168Q9H0V1 697 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 L2HGDHQ9H9P8 463 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 PRDM11Q9NQV5 511 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 ANLNQ9NQW6 1124 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 TOPORSQ9NS56 1045 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-211ENST00000525970 ST6GALNAC2Q9UJ37 374 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 ZBTB21Q9ULJ3 1066 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 SRPK3Q9UPE1 567 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 WASHC2AQ641Q2 1341 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 SLC12A8A0AV02 714 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 NPEPPSL1A6NEC2 478 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 MAN2B1O00754 1011 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 ZRANB2O95218 330 aaKnown RBP eCLIP5.88□□□□□ -1.47
CSDE1-211ENST00000525970 PTPN1P18031 435 aaKnown RBP5.88□□□□□ -1.47
CSDE1-211ENST00000525970 CCND1P24385 295 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 IL13P35225 146 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 GDF5P43026 501 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 GALEQ14376 348 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 CDSNQ15517 529 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 VASNQ6EMK4 673 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 SLC4A10Q6U841 1118 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 KSR2Q6VAB6 950 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 TSHZ1Q6ZSZ6 1077 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 ZNF610Q8N9Z0 462 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 DNERQ8NFT8 737 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 SH3RF3Q8TEJ3 882 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-211ENST00000525970 ZSWIM3Q96MP5 696 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 ELF4Q99607 663 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-211ENST00000525970 SARGQ9BW04 601 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 ZMAT4Q9H898 229 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 RBPJLQ9UBG7 517 aa5.88□□□□□ -1.47
CSDE1-211ENST00000525970 H7C1D1 291 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 ACOT7O00154 380 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 SCDO00767 359 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 H2AFYO75367 372 aaKnown RBP5.87□□□□□ -1.47
CSDE1-211ENST00000525970 LDHAP00338 332 aaKnown RBP5.87□□□□□ -1.47
CSDE1-211ENST00000525970 ENO2P09104 434 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-211ENST00000525970 LSP1P33241 339 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 ICAM4Q14773 271 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 FIGNQ5HY92 759 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 PGM2L1Q6PCE3 622 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 B3GNT9Q6UX72 402 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 CIR1Q86X95 450 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-211ENST00000525970 KLHL36Q8N4N3 616 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 KIAA1958Q8N8K9 716 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 DLG3Q92796 817 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 RUNDC1Q96C34 613 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 TIFAQ96CG3 184 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 CLIP3Q96DZ5 547 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 HSPBAP1Q96EW2 488 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 MPHOSPH6Q99547 160 aaKnown RBP5.87□□□□□ -1.47
CSDE1-211ENST00000525970 ZDHHC5Q9C0B5 715 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 KLC2Q9H0B6 622 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 CD248Q9HCU0 757 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 HSPBP1Q9NZL4 362 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 CROTQ9UKG9 612 aa5.87□□□□□ -1.47
CSDE1-211ENST00000525970 FAM90A27PA6NNH2 459 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 CYR61O00622 381 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 ERC2O15083 957 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 VCAM1P19320 739 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 SLC9A1P19634 815 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 GJA4P35212 333 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 PPP2CBP62714 309 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 PPP2CAP67775 309 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 IRF9Q00978 393 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 MOGSQ13724 837 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 PDCD1Q15116 288 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 LONRF3Q496Y0 759 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 PPP4R4Q6NUP7 873 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 CRIP3Q6Q6R5 217 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 ARHGEF18Q6ZSZ5 1173 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 SPRED1Q7Z699 444 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 PJA1Q8NG27 643 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 IL17RAQ96F46 866 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 PDGFDQ9GZP0 370 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-211ENST00000525970 MS4A5Q9H3V2 200 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 FTSJ1Q9UET6 329 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 B3GALT1Q9Y5Z6 326 aa5.86□□□□□ -1.47
CSDE1-211ENST00000525970 PRAMEF25A6NGN4 478 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 GPR42O15529 346 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 CREB3O43889 395 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 CLASP2O75122 1294 aaKnown RBP5.85□□□□□ -1.47
CSDE1-211ENST00000525970 CT47B1P0C2W7 299 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-211ENST00000525970 MLLT6P55198 1093 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-211ENST00000525970 SCAND1P57086 179 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 PFKPQ01813 784 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 OS9Q13438 667 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms