RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 BDP1A6H8Y1 2624 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 FSD2A1L4K1 749 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 FGF18O76093 207 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 CSPG5O95196 566 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 FGFR4P22455 802 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 FOSBP53539 338 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 TWF2Q6IBS0 349 aaKnown RBP13□□□□□ -0.33
HIF3A-209ENST00000525854 PDE12Q6L8Q7 609 aaKnown RBP13□□□□□ -0.33
HIF3A-209ENST00000525854 CATSPER4Q7RTX7 472 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 TPH2Q8IWU9 490 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 FAM178BQ8IXR5 827 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 MICAL1Q8TDZ2 1067 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 DYDC2Q96IM9 177 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 CASD1Q96PB1 797 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 TRAIPQ9BWF2 469 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 MRPL9Q9BYD2 267 aaKnown RBP13□□□□□ -0.33
HIF3A-209ENST00000525854 IGFLR1Q9H665 355 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 TTC12Q9H892 705 aaPredicted RBP13□□□□□ -0.33
HIF3A-209ENST00000525854 TLR9Q9NR96 1032 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 SH2B1Q9NRF2 756 aaPredicted RBP13□□□□□ -0.33
HIF3A-209ENST00000525854 RGL1Q9NZL6 768 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 WRAP73Q9P2S5 460 aaPredicted RBP13□□□□□ -0.33
HIF3A-209ENST00000525854 PUF60Q9UHX1 559 aaKnown RBP13□□□□□ -0.33
HIF3A-209ENST00000525854 LZTS1Q9Y250 596 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 COL4A3BPQ9Y5P4 624 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 XIRP2A4UGR9 3374 aa13□□□□□ -0.33
HIF3A-209ENST00000525854 REV3LO60673 3130 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 ASAP2O43150 1006 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 CSDE1O75534 798 aaKnown RBP12.99□□□□□ -0.33
HIF3A-209ENST00000525854 SLITRK3O94933 977 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 IL9P15248 144 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 PPM1AP35813 382 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 LTBRP36941 435 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 RAB27AP51159 221 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 HMGN5P82970 282 aaKnown RBP12.99□□□□□ -0.33
HIF3A-209ENST00000525854 PLCB3Q01970 1234 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 CYP4A11Q02928 519 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 KRT17Q04695 432 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 ST3GAL1Q11201 340 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 CTTNQ14247 550 aaKnown RBP12.99□□□□□ -0.33
HIF3A-209ENST00000525854 EMC2Q15006 297 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 XKR9Q5GH70 373 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 ZNF598Q86UK7 904 aaKnown RBP12.99□□□□□ -0.33
HIF3A-209ENST00000525854 KSR1Q8IVT5 923 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 CCDC83Q8IWF9 413 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 EFHBQ8N7U6 833 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 PRPF31Q8WWY3 499 aaKnown RBP12.99□□□□□ -0.33
HIF3A-209ENST00000525854 TMEM143Q96AN5 459 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 C8orf76Q96K31 380 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 ZNF558Q96NG5 402 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 HSD17B14Q9BPX1 270 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 EIF2AK1Q9BQI3 630 aaKnown RBP12.99□□□□□ -0.33
HIF3A-209ENST00000525854 CWH43Q9H720 699 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 RNF19AQ9NV58 838 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 PRKAG3Q9UGI9 489 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 PIN4Q9Y237 131 aaKnown RBP12.99□□□□□ -0.33
HIF3A-209ENST00000525854 WDR81Q562E7 1941 aa12.99□□□□□ -0.33
HIF3A-209ENST00000525854 MUC3AQ02505 3323 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 CARNS1A5YM72 827 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 LYPLA2O95372 231 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 SSTR3P32745 418 aaPredicted RBP12.98□□□□□ -0.33
HIF3A-209ENST00000525854 IRS1P35568 1242 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 TXKP42681 527 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 PHKA2P46019 1235 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 NDUFV1P49821 464 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 LAMTOR4Q0VGL1 99 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 ADAM15Q13444 863 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 MXD4Q14582 209 aaPredicted RBP12.98□□□□□ -0.33
HIF3A-209ENST00000525854 CLLU1OSQ5K130 101 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 KCNT2Q6UVM3 1135 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 SRGAP1Q7Z6B7 1085 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 GJD3Q8N144 294 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
HIF3A-209ENST00000525854 FAM184AQ8NB25 1140 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 CCDC43Q96MW1 224 aaKnown RBP12.98□□□□□ -0.33
HIF3A-209ENST00000525854 MTMR9Q96QG7 549 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 TLE6Q9H808 572 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 IFT122Q9HBG6 1241 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 SPG21Q9NZD8 308 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 CD207Q9UJ71 328 aa12.98□□□□□ -0.33
HIF3A-209ENST00000525854 ZNF623O75123 536 aa12.97□□□□□ -0.33
HIF3A-209ENST00000525854 SRGAP2CP0DJJ0 459 aa12.97□□□□□ -0.33
HIF3A-209ENST00000525854 ATF7P17544 494 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-209ENST00000525854 GTF2F1P35269 517 aaKnown RBP eCLIP12.97□□□□□ -0.33
HIF3A-209ENST00000525854 NRIP1P48552 1158 aa12.97□□□□□ -0.33
HIF3A-209ENST00000525854 ALDH7A1P49419 539 aaKnown RBP12.97□□□□□ -0.33
HIF3A-209ENST00000525854 RBM25P49756 843 aaKnown RBP12.97□□□□□ -0.33
HIF3A-209ENST00000525854 GUCY1B3Q02153 619 aa12.97□□□□□ -0.33
HIF3A-209ENST00000525854 ORC2Q13416 577 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-209ENST00000525854 SMAD4Q13485 552 aaKnown RBP12.97□□□□□ -0.33
HIF3A-209ENST00000525854 GNL2Q13823 731 aaKnown RBP12.97□□□□□ -0.33
HIF3A-209ENST00000525854 TFDP1Q14186 410 aa12.97□□□□□ -0.33
HIF3A-209ENST00000525854 PCBP1Q15365 356 aaKnown RBP eCLIP12.97□□□□□ -0.33
HIF3A-209ENST00000525854 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
HIF3A-209ENST00000525854 GLB1LQ6UWU2 654 aa12.97□□□□□ -0.33
HIF3A-209ENST00000525854 LRRC55Q6ZSA7 311 aa12.97□□□□□ -0.33
HIF3A-209ENST00000525854 ADGRD2Q7Z7M1 963 aa12.97□□□□□ -0.33
HIF3A-209ENST00000525854 FERMT3Q86UX7 667 aa12.97□□□□□ -0.33
HIF3A-209ENST00000525854 HELQQ8TDG4 1101 aa12.97□□□□□ -0.33
HIF3A-209ENST00000525854 MRPS27Q92552 414 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms