RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 PIGOQ8TEQ8 1089 aa14.23□□□□□ -0.13
CLP1-202ENST00000525602 TMEM143Q96AN5 459 aa14.23□□□□□ -0.13
CLP1-202ENST00000525602 INTS4Q96HW7 963 aaKnown RBP14.23□□□□□ -0.13
CLP1-202ENST00000525602 NLRP4Q96MN2 994 aa14.23□□□□□ -0.13
CLP1-202ENST00000525602 ADAM2Q99965 735 aa14.23□□□□□ -0.13
CLP1-202ENST00000525602 POLR3CQ9BUI4 534 aaPredicted RBP14.23□□□□□ -0.13
CLP1-202ENST00000525602 ANKEF1Q9NU02 776 aa14.23□□□□□ -0.13
CLP1-202ENST00000525602 LMCD1Q9NZU5 365 aa14.23□□□□□ -0.13
CLP1-202ENST00000525602 RALGAPA2Q2PPJ7 1873 aa14.23□□□□□ -0.13
CLP1-202ENST00000525602 A0A087WZ62 844 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.22□□□□□ -0.13
CLP1-202ENST00000525602 DENND3A2RUS2 1198 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 LAD1O00515 517 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 FGFR4P22455 802 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 RPA1P27694 616 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 SARSP49591 514 aaKnown RBP14.22□□□□□ -0.13
CLP1-202ENST00000525602 RARRES1P49788 294 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 DSC3Q14574 896 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 LEXMQ3ZCV2 418 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 HAUS3Q68CZ6 603 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 PTCRAQ6ISU1 281 aaPredicted RBP14.22□□□□□ -0.13
CLP1-202ENST00000525602 KSR1Q8IVT5 923 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 CRIPAKQ8N1N5 446 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 TCP11Q8WWU5 503 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 PSPC1Q8WXF1 523 aaKnown RBP14.22□□□□□ -0.13
CLP1-202ENST00000525602 SNX21Q969T3 373 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 CCDC43Q96MW1 224 aaKnown RBP14.22□□□□□ -0.13
CLP1-202ENST00000525602 MTRQ99707 1265 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 FDXACB1Q9BRP7 624 aaPredicted RBP14.22□□□□□ -0.13
CLP1-202ENST00000525602 GCOM2Q9BZD3 368 aaPredicted RBP14.22□□□□□ -0.13
CLP1-202ENST00000525602 XPNPEP1Q9NQW7 623 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 RGS18Q9NS28 235 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 C1orf112Q9NSG2 853 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 COL4A3BPQ9Y5P4 624 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 ADGRA3Q8IWK6 1321 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 A0A087WWV3 80 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 VPS37CA5D8V6 355 aaPredicted RBP14.22□□□□□ -0.13
CLP1-202ENST00000525602 PI4K2BG5E9Z4 385 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 DGAT1O75907 488 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 DGKIO75912 1065 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 CSPG5O95196 566 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 XRCC6P12956 609 aaKnown RBP eCLIP14.22□□□□□ -0.13
CLP1-202ENST00000525602 PDCP20941 246 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 SSTR3P32745 418 aaPredicted RBP14.22□□□□□ -0.13
CLP1-202ENST00000525602 PRPHP41219 470 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 ATP2C1P98194 919 aaPredicted RBP14.22□□□□□ -0.13
CLP1-202ENST00000525602 EPC2Q52LR7 807 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 POTEGQ6S5H5 508 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 BRAPQ7Z569 592 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 FAM178BQ8IXR5 827 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 GJD3Q8N144 294 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 IGSF22Q8N9C0 903 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 ZNF689Q96CS4 500 aaPredicted RBP14.22□□□□□ -0.13
CLP1-202ENST00000525602 RAB34Q9BZG1 259 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 ATP6V0A4Q9HBG4 840 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 LRWD1Q9UFC0 647 aa14.22□□□□□ -0.13
CLP1-202ENST00000525602 KIAA1671Q9BY89 1806 aa14.21□□□□□ -0.13
CLP1-202ENST00000525602 ZNF318Q5VUA4 2279 aa14.21□□□□□ -0.13
CLP1-202ENST00000525602 C9IYK1 514 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 GPR37L1O60883 481 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 CSDE1O75534 798 aaKnown RBP14.21□□□□□ -0.14
CLP1-202ENST00000525602 STAG3L1P0CL83 205 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 IBSPP21815 317 aaPredicted RBP14.21□□□□□ -0.14
CLP1-202ENST00000525602 SFPQP23246 707 aaKnown RBP eCLIP14.21□□□□□ -0.14
CLP1-202ENST00000525602 LAMTOR4Q0VGL1 99 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 PDIA5Q14554 519 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 IL17AQ16552 155 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 TCEAL5Q5H9L2 206 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 SLC24A5Q71RS6 500 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 FERMT3Q86UX7 667 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 PRPF31Q8WWY3 499 aaKnown RBP14.21□□□□□ -0.14
CLP1-202ENST00000525602 MRPL38Q96DV4 380 aaKnown RBP14.21□□□□□ -0.14
CLP1-202ENST00000525602 SAMD11Q96NU1 681 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 NACC1Q96RE7 527 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 IFT122Q9HBG6 1241 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 DBR1Q9UK59 544 aaKnown RBP14.21□□□□□ -0.14
CLP1-202ENST00000525602 LRFN2Q9ULH4 789 aa14.21□□□□□ -0.14
CLP1-202ENST00000525602 USP34Q70CQ2 3546 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 USO1O60763 962 aaKnown RBP14.2□□□□□ -0.14
CLP1-202ENST00000525602 SYT1P21579 422 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 MUTP22033 750 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 CCT6AP40227 531 aaKnown RBP14.2□□□□□ -0.14
CLP1-202ENST00000525602 GATMP50440 423 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 ECM1Q16610 540 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 DTHD1Q6ZMT9 781 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 EP400NLQ6ZTU2 488 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 HSCBQ8IWL3 235 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 FIBCD1Q8N539 461 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 SNX29Q8TEQ0 813 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 INO80BQ9C086 356 aaPredicted RBP14.2□□□□□ -0.14
CLP1-202ENST00000525602 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
CLP1-202ENST00000525602 PCDHB7Q9Y5E2 793 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 STK24Q9Y6E0 443 aa14.2□□□□□ -0.14
CLP1-202ENST00000525602 GRXCR2A6NFK2 248 aa14.19□□□□□ -0.14
CLP1-202ENST00000525602 PP2D1A8MPX8 630 aa14.19□□□□□ -0.14
CLP1-202ENST00000525602 ASAP2O43150 1006 aa14.19□□□□□ -0.14
CLP1-202ENST00000525602 LINC00271P0C7V0 271 aa14.19□□□□□ -0.14
CLP1-202ENST00000525602 SRGAP2CP0DJJ0 459 aa14.19□□□□□ -0.14
CLP1-202ENST00000525602 ZSCAN20P17040 1043 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms