RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 LGSNQ5TDP6 509 aa18.35■□□□□ 0.53
BEST1-203ENST00000524877 ZNF449Q6P9G9 518 aa18.35■□□□□ 0.53
BEST1-203ENST00000524877 C4orf50Q6ZRC1 276 aa18.35■□□□□ 0.53
BEST1-203ENST00000524877 EIF3CQ99613 913 aaKnown RBP18.35■□□□□ 0.53
BEST1-203ENST00000524877 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
BEST1-203ENST00000524877 SYNGAP1Q96PV0 1343 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 LRRC23Q53EV4 343 aaPredicted RBP18.34■□□□□ 0.53
BEST1-203ENST00000524877 CFAP157Q5JU67 520 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 CC2D1AQ6P1N0 951 aaPredicted RBP18.34■□□□□ 0.53
BEST1-203ENST00000524877 DNERQ8NFT8 737 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 KIF1CO43896 1103 aaKnown RBP18.34■□□□□ 0.53
BEST1-203ENST00000524877 OAZ1P54368 228 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 NUDT18Q6ZVK8 323 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 PROM2Q8N271 834 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 PPFIBP2Q8ND30 876 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 TRIM58Q8NG06 486 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 EEF2KMTQ96G04 330 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 KAZALD1Q96I82 304 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 DONSONQ9NYP3 566 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 RBAKQ9NYW8 714 aaPredicted RBP18.34■□□□□ 0.53
BEST1-203ENST00000524877 KCND2Q9NZV8 630 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 GPR182O15218 404 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 KNOP1Q1ED39 458 aaKnown RBP18.34■□□□□ 0.53
BEST1-203ENST00000524877 ZNF484Q5JVG2 852 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 FBXO16Q8IX29 292 aaPredicted RBP18.34■□□□□ 0.53
BEST1-203ENST00000524877 PLCB4Q15147 1175 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 SELENOSQ9BQE4 189 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 TUBBP07437 444 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 HOXC6P09630 235 aa18.34■□□□□ 0.53
BEST1-203ENST00000524877 ATN1P54259 1190 aaPredicted RBP18.34■□□□□ 0.53
BEST1-203ENST00000524877 APOBEC3HQ6NTF7 200 aaKnown RBP18.34■□□□□ 0.53
BEST1-203ENST00000524877 H7C0C1 242 aa18.33■□□□□ 0.53
BEST1-203ENST00000524877 HOXA2O43364 376 aa18.33■□□□□ 0.53
BEST1-203ENST00000524877 ATP5OP48047 213 aa18.33■□□□□ 0.53
BEST1-203ENST00000524877 ATP2C1P98194 919 aaPredicted RBP18.33■□□□□ 0.53
BEST1-203ENST00000524877 HAUS6Q7Z4H7 955 aa18.33■□□□□ 0.53
BEST1-203ENST00000524877 ERICH1Q86X53 443 aa18.33■□□□□ 0.53
BEST1-203ENST00000524877 KCNH7Q9NS40 1196 aa18.33■□□□□ 0.53
BEST1-203ENST00000524877 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.33■□□□□ 0.53
BEST1-203ENST00000524877 A0A087WWV3 80 aa18.33■□□□□ 0.53
BEST1-203ENST00000524877 PRPSAP2O60256 369 aa18.33■□□□□ 0.53
BEST1-203ENST00000524877 HEXIM1O94992 359 aaKnown RBP18.33■□□□□ 0.53
BEST1-203ENST00000524877 ZSCAN26Q16670 478 aa18.33■□□□□ 0.53
BEST1-203ENST00000524877 SEPT8Q92599 483 aa18.33■□□□□ 0.53
BEST1-203ENST00000524877 FAM217BQ9NTX9 383 aaPredicted RBP18.33■□□□□ 0.53
BEST1-203ENST00000524877 GFPT2O94808 682 aa18.33■□□□□ 0.52
BEST1-203ENST00000524877 GUCY1A2P33402 732 aa18.33■□□□□ 0.52
BEST1-203ENST00000524877 ZNF746Q6NUN9 644 aaPredicted RBP18.33■□□□□ 0.52
BEST1-203ENST00000524877 AKR1A1P14550 325 aa18.33■□□□□ 0.52
BEST1-203ENST00000524877 SP3Q02447 781 aa18.33■□□□□ 0.52
BEST1-203ENST00000524877 NDUFAF2Q8N183 169 aa18.33■□□□□ 0.52
BEST1-203ENST00000524877 NCAPGQ9BPX3 1015 aa18.33■□□□□ 0.52
BEST1-203ENST00000524877 RGL1Q9NZL6 768 aa18.33■□□□□ 0.52
BEST1-203ENST00000524877 MTG1Q9BT17 334 aaPredicted RBP18.32■□□□□ 0.52
BEST1-203ENST00000524877 CYP27A1Q02318 531 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 SPATA2LQ8IUW3 424 aaPredicted RBP18.32■□□□□ 0.52
BEST1-203ENST00000524877 TRIM62Q9BVG3 475 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 NR2E3Q9Y5X4 410 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 IKBKBO14920 756 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 GAS2O43903 313 aaKnown RBP18.32■□□□□ 0.52
BEST1-203ENST00000524877 RHOXF2BP0C7M4 288 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 ERVK-9P63128 1117 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 ERVK-24P63145 666 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 TADA2BQ86TJ2 420 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 AFAP1L2Q8N4X5 818 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 TRPM4Q8TD43 1214 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 RHOXF2Q9BQY4 288 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 CNTNAP5Q8WYK1 1306 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 RALAP11233 206 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 VAMP7P51809 220 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 STRIP2Q9ULQ0 834 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 CYP2C8P10632 490 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 KAZNQ674X7 775 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 ANAPC5Q9UJX4 755 aa18.32■□□□□ 0.52
BEST1-203ENST00000524877 KLHL7Q8IXQ5 586 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 ARHGAP25P42331 645 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 PDE1CQ14123 709 aaPredicted RBP18.31■□□□□ 0.52
BEST1-203ENST00000524877 DUOXA2Q1HG44 320 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 NOTUMQ6P988 496 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 IFT20Q8IY31 132 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 P2RX7Q99572 595 aaKnown RBP18.31■□□□□ 0.52
BEST1-203ENST00000524877 TRIM4Q9C037 500 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 RNF208Q9H0X6 261 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 TSPYL2Q9H2G4 693 aaPredicted RBP18.31■□□□□ 0.52
BEST1-203ENST00000524877 TMEM63CQ9P1W3 806 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 ZNF142P52746 1687 aaPredicted RBP18.31■□□□□ 0.52
BEST1-203ENST00000524877 NALCNQ8IZF0 1738 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 A8MXQ7 604 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 RECQLP46063 649 aaPredicted RBP18.31■□□□□ 0.52
BEST1-203ENST00000524877 PRMT7Q9NVM4 692 aaPredicted RBP18.31■□□□□ 0.52
BEST1-203ENST00000524877 ESYT2A0FGR8 921 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 CD4P01730 458 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 CHGBP05060 677 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 ZNF18P17022 549 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 SHMT1P34896 483 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 SHCBP1Q8NEM2 672 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 FAM163AQ96GL9 167 aaPredicted RBP18.31■□□□□ 0.52
BEST1-203ENST00000524877 CCDC68Q9H2F9 335 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 KCNK9Q9NPC2 374 aa18.31■□□□□ 0.52
BEST1-203ENST00000524877 TLDC2A0PJX2 215 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms