RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 GNPTABQ3T906 1256 aa9.36□□□□□ -0.91
PUM1-213ENST00000524516 FAM43BQ6ZT52 329 aaPredicted RBP9.36□□□□□ -0.91
PUM1-213ENST00000524516 CACNA2D4Q7Z3S7 1137 aa9.36□□□□□ -0.91
PUM1-213ENST00000524516 SLC32A1Q9H598 525 aa9.36□□□□□ -0.91
PUM1-213ENST00000524516 LMAN1LQ9HAT1 526 aa9.36□□□□□ -0.91
PUM1-213ENST00000524516 EPB41L4AQ9HCS5 686 aaPredicted RBP9.36□□□□□ -0.91
PUM1-213ENST00000524516 IL17RBQ9NRM6 502 aa9.36□□□□□ -0.91
PUM1-213ENST00000524516 RNF19AQ9NV58 838 aa9.36□□□□□ -0.91
PUM1-213ENST00000524516 ERAP1Q9NZ08 941 aa9.36□□□□□ -0.91
PUM1-213ENST00000524516 CDH7Q9ULB5 785 aa9.36□□□□□ -0.91
PUM1-213ENST00000524516 ST3GAL5Q9UNP4 418 aa9.36□□□□□ -0.91
PUM1-213ENST00000524516 MRPL11Q9Y3B7 192 aaKnown RBP9.36□□□□□ -0.91
PUM1-213ENST00000524516 NOC2LQ9Y3T9 749 aaKnown RBP9.36□□□□□ -0.91
PUM1-213ENST00000524516 PCDHA1Q9Y5I3 950 aa9.36□□□□□ -0.91
PUM1-213ENST00000524516 DOCK5Q9H7D0 1870 aa9.36□□□□□ -0.91
PUM1-213ENST00000524516 HECTD1Q9ULT8 2610 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 KDM3AQ9Y4C1 1321 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 RRN3P2A6NIE6 340 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 MAN2B1O00754 1011 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 C2CD2LO14523 706 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 ADH1AP07327 375 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 PDHBP11177 359 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 TCF7P36402 384 aaPredicted RBP9.35□□□□□ -0.91
PUM1-213ENST00000524516 RAP1GAPP47736 663 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 SIM1P81133 766 aaPredicted RBP9.35□□□□□ -0.91
PUM1-213ENST00000524516 KCNC4Q03721 635 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 SRSF1Q07955 248 aaKnown RBP eCLIP9.35□□□□□ -0.917e-11■■■■□ 19.8
PUM1-213ENST00000524516 KBTBD6Q86V97 674 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 VSIG10LQ86VR7 867 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 ERC1Q8IUD2 1116 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 ZNF843Q8N446 348 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 IL31RAQ8NI17 732 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 HELQQ8TDG4 1101 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 ZNF707Q96C28 371 aaPredicted RBP9.35□□□□□ -0.91
PUM1-213ENST00000524516 CRELD1Q96HD1 420 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 IGSF21Q96ID5 467 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 ADAMTS10Q9H324 1103 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 IL1RAPL2Q9NP60 686 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 TMEM9BQ9NQ34 198 aa9.35□□□□□ -0.91
PUM1-213ENST00000524516 MRPL17Q9NRX2 175 aaKnown RBP9.35□□□□□ -0.91
PUM1-213ENST00000524516 NOP58Q9Y2X3 529 aaKnown RBP9.35□□□□□ -0.91
PUM1-213ENST00000524516 CARNS1A5YM72 827 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 H0Y626 953 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 ATXN7O15265 892 aaPredicted RBP9.34□□□□□ -0.91
PUM1-213ENST00000524516 RANBP6O60518 1105 aaKnown RBP9.34□□□□□ -0.91
PUM1-213ENST00000524516 RPP40O75818 363 aaKnown RBP9.34□□□□□ -0.91
PUM1-213ENST00000524516 TRIM16O95361 564 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 AK2P54819 239 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 FAM189BP81408 668 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 ZNF543Q08ER8 600 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 CCDC184Q52MB2 194 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 CLLU1OSQ5K130 101 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 CHCHD4Q8N4Q1 142 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 MDM1Q8TC05 714 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 SPATA18Q8TC71 538 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 BOLA2Q9H3K6 86 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 TELO2Q9Y4R8 837 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 LAMA5O15230 3695 aa9.34□□□□□ -0.91
PUM1-213ENST00000524516 USP9XQ93008 2570 aaPredicted RBP9.33□□□□□ -0.92
PUM1-213ENST00000524516 SPAARA0A1B0GVQ0 90 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 LNP1A1A4G5 178 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 K7ESF4 209 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 CAPN9O14815 690 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 DHX16O60231 1041 aaKnown RBP9.33□□□□□ -0.92
PUM1-213ENST00000524516 URODP06132 367 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 IFIT2P09913 472 aaKnown RBP9.33□□□□□ -0.92
PUM1-213ENST00000524516 SPATA31D3P0C874 917 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 TOP1P11387 765 aaKnown RBP9.33□□□□□ -0.92
PUM1-213ENST00000524516 INSRRP14616 1297 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 GNAT2P19087 354 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 SPATA31D4Q6ZUB0 917 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 WDR5BQ86VZ2 330 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 ECHDC2Q86YB7 292 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 NME8Q8N427 588 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 SPEM1Q8N4L4 309 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 BCL7CQ8WUZ0 217 aaPredicted RBP9.33□□□□□ -0.92
PUM1-213ENST00000524516 TRAPPC12Q8WVT3 735 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 TMEM40Q8WWA1 233 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 GAB3Q8WWW8 586 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 FAM3CQ92520 227 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 PPP1R16BQ96T49 567 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 NT5C3AQ9H0P0 336 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 JADE2Q9NQC1 790 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 TCP11L1Q9NUJ3 509 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 PCDHA2Q9Y5H9 948 aa9.33□□□□□ -0.92
PUM1-213ENST00000524516 PYCARD-AS1I3L0S3 204 aa9.32□□□□□ -0.92
PUM1-213ENST00000524516 FIBPO43427 364 aa9.32□□□□□ -0.92
PUM1-213ENST00000524516 CAVIN2O95810 425 aa9.32□□□□□ -0.92
PUM1-213ENST00000524516 GOLGA8HP0CJ92 632 aa9.32□□□□□ -0.92
PUM1-213ENST00000524516 ZSCAN20P17040 1043 aaPredicted RBP9.32□□□□□ -0.92
PUM1-213ENST00000524516 HOXA13P31271 388 aaPredicted RBP9.32□□□□□ -0.92
PUM1-213ENST00000524516 HSD17B4P51659 736 aa9.32□□□□□ -0.92
PUM1-213ENST00000524516 CREB5Q02930 508 aa9.32□□□□□ -0.92
PUM1-213ENST00000524516 PPARAQ07869 468 aa9.32□□□□□ -0.92
PUM1-213ENST00000524516 FGF13Q92913 245 aa9.32□□□□□ -0.92
PUM1-213ENST00000524516 TNPO1Q92973 898 aaKnown RBP9.32□□□□□ -0.92
PUM1-213ENST00000524516 NACAP1Q9BZK3 213 aa9.32□□□□□ -0.92
PUM1-213ENST00000524516 PRKD2Q9BZL6 878 aa9.32□□□□□ -0.92
PUM1-213ENST00000524516 UBA5Q9GZZ9 404 aa9.32□□□□□ -0.92
PUM1-213ENST00000524516 GBP3Q9H0R5 595 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms