RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-216ENST00000524481 ADAT2Q7Z6V5 191 aaKnown RBP12.81□□□□□ -0.36
PTPRK-216ENST00000524481 ERO1BQ86YB8 467 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 GLYCTKQ8IVS8 523 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 BSNDQ8WZ55 320 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 POLR3FQ9H1D9 316 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-216ENST00000524481 ZNF302Q9NR11 478 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 PDGFCQ9NRA1 345 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 OLFML3Q9NRN5 406 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 HSPBP1Q9NZL4 362 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 CEP72Q9P209 647 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 TRPC6Q9Y210 931 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 MRFAP1Q9Y605 127 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 LTBP3Q9NS15 1303 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 PPARDQ03181 441 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 DRAP1Q14919 205 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-216ENST00000524481 MIS18BP1Q6P0N0 1132 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 TMCO3Q6UWJ1 677 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 FRMD5Q7Z6J6 570 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 KAT5Q92993 513 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 ZBTB45Q96K62 511 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-216ENST00000524481 SCLT1Q96NL6 688 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 AZI2Q9H6S1 392 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 SALL4Q9UJQ4 1053 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 FRMD3A2A2Y4 597 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 POLR3GO15318 223 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-216ENST00000524481 STAT1P42224 750 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 FMO5P49326 533 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 LIG4P49917 911 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 VAV2P52735 878 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 KLHDC7AQ5VTJ3 777 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 NOA1Q8NC60 698 aaKnown RBP12.81□□□□□ -0.36
PTPRK-216ENST00000524481 SLC7A3Q8WY07 619 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 GOLGA1Q92805 767 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 MS4A14Q96JA4 679 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 NLRP4Q96MN2 994 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 PORCNQ9H237 461 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 ODF2LQ9ULJ1 636 aa12.81□□□□□ -0.36
PTPRK-216ENST00000524481 EIF3CLB5ME19 914 aaKnown RBP12.8□□□□□ -0.36
PTPRK-216ENST00000524481 KRT5P13647 590 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 KLRC1P26715 233 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 FAM193AP78312 1265 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 CETN1Q12798 172 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 HSDL1Q3SXM5 330 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 IQCEQ6IPM2 695 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 XXYLT1Q8NBI6 393 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 DEPTORQ8TB45 409 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 EIF3CQ99613 913 aaKnown RBP12.8□□□□□ -0.36
PTPRK-216ENST00000524481 PARD6BQ9BYG5 372 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 L2HGDHQ9H9P8 463 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 CGNQ9P2M7 1197 aaKnown RBP12.8□□□□□ -0.36
PTPRK-216ENST00000524481 FRMPD4Q14CM0 1322 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 A0A0U1RQG5 324 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-216ENST00000524481 KCNA2P16389 499 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 SFNP31947 248 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 VAMP7P51809 220 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 LBX2Q6XYB7 198 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 EPM2AIP1Q7L775 607 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-216ENST00000524481 DHX37Q8IY37 1157 aaKnown RBP12.8□□□□□ -0.36
PTPRK-216ENST00000524481 CCDC170Q8IYT3 715 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 ARGLU1Q9NWB6 273 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-216ENST00000524481 MYO1AQ9UBC5 1043 aa12.8□□□□□ -0.36
PTPRK-216ENST00000524481 K7ERI5 159 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 EIF3JO75822 258 aaKnown RBP12.79□□□□□ -0.36
PTPRK-216ENST00000524481 SERPING1P05155 500 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 BCRP11274 1271 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 TCF7P36402 384 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-216ENST00000524481 ALDH5A1P51649 535 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-216ENST00000524481 STAT5BP51692 787 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 PPP3CAQ08209 521 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 C2orf54Q08AI8 447 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 DRP2Q13474 957 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 ALKBH5Q6P6C2 394 aaKnown RBP12.79□□□□□ -0.36
PTPRK-216ENST00000524481 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-216ENST00000524481 MMS19Q96T76 1030 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 RRAGCQ9HB90 399 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 CYP26B1Q9NR63 512 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 SOWAHBA6NEL2 793 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 TNNT3P45378 269 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-216ENST00000524481 CLCN6P51797 869 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 SLC7A5Q01650 507 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 BFSP1Q12934 665 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 STRN3Q13033 797 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 C2CD6Q53TS8 623 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 ZNF571Q7Z3V5 609 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-216ENST00000524481 C4orf19Q8IY42 314 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 REPS2Q8NFH8 660 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 ALS2CR12Q96Q35 445 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 MMP19Q99542 508 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 TARS2Q9BW92 718 aaKnown RBP12.79□□□□□ -0.36
PTPRK-216ENST00000524481 FOXN3O00409 490 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-216ENST00000524481 EVI5O60447 810 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 PALMO75781 387 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 FDX1P10109 184 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 TXNP10599 105 aaKnown RBP12.79□□□□□ -0.36
PTPRK-216ENST00000524481 TNFAIP3P21580 790 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 GUCY2CP25092 1073 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 SKIDA1Q1XH10 827 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 DPP9Q86TI2 863 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms