RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 PADI6Q6TGC4 694 aa18.44■□□□□ 0.54
CSGALNACT1-216ENST00000524213 RASSF8Q8NHQ8 419 aa18.44■□□□□ 0.54
CSGALNACT1-216ENST00000524213 TOP1MTQ969P6 601 aa18.44■□□□□ 0.54
CSGALNACT1-216ENST00000524213 TMEM143Q96AN5 459 aa18.44■□□□□ 0.54
CSGALNACT1-216ENST00000524213 CSRNP2Q9H175 543 aa18.44■□□□□ 0.54
CSGALNACT1-216ENST00000524213 BHMT2Q9H2M3 363 aa18.44■□□□□ 0.54
CSGALNACT1-216ENST00000524213 XPNPEP1Q9NQW7 623 aa18.44■□□□□ 0.54
CSGALNACT1-216ENST00000524213 BMP2KQ9NSY1 1161 aaPredicted RBP18.44■□□□□ 0.54
CSGALNACT1-216ENST00000524213 CCDC39Q9UFE4 941 aa18.44■□□□□ 0.54
CSGALNACT1-216ENST00000524213 PADI3Q9ULW8 664 aa18.44■□□□□ 0.54
CSGALNACT1-216ENST00000524213 E9PMD0 336 aa18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 DARSP14868 501 aaKnown RBP18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 CYP11B2P19099 503 aa18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 GRIN1Q05586 938 aa18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 NFX1Q12986 1120 aaKnown RBP18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 GRB10Q13322 594 aa18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 ADGRE1Q14246 886 aa18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 MAFAQ8NHW3 353 aaPredicted RBP18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 KCNG4Q8TDN1 519 aa18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 TMEM40Q8WWA1 233 aa18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 PRPF31Q8WWY3 499 aaKnown RBP18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 LINC01599Q8WXQ3 324 aa18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 NLRP4Q96MN2 994 aa18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 PNMA5Q96PV4 448 aa18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 GAS2L1Q99501 681 aaPredicted RBP18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 ERVK-5Q9HDB9 667 aa18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 NOC2LQ9Y3T9 749 aaKnown RBP18.43■□□□□ 0.54
CSGALNACT1-216ENST00000524213 RALGAPA2Q2PPJ7 1873 aa18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 A0A087WZ62 844 aa18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 EPOPA6NHQ4 379 aa18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 RFXAPO00287 272 aa18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 ENPP3O14638 875 aa18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 HTRA4P83105 476 aaPredicted RBP18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 POU5F1BQ06416 359 aa18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 TMEM119Q4V9L6 283 aa18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 SRGAP1Q7Z6B7 1085 aa18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 RTN4RL1Q86UN2 441 aaPredicted RBP18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 FDXACB1Q9BRP7 624 aaPredicted RBP18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 ZDHHC9Q9Y397 364 aa18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 INSL6Q9Y581 213 aa18.42■□□□□ 0.54
CSGALNACT1-216ENST00000524213 LINC01553A4QN01 128 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 SFPQP23246 707 aaKnown RBP eCLIP18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 ARL2P36404 184 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 KRT85P78386 507 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 DNM1Q05193 864 aaKnown RBP18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 LAMTOR4Q0VGL1 99 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 FOXD4L6Q3SYB3 417 aaPredicted RBP18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 FOXD4L3Q6VB84 417 aaPredicted RBP18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 FAM228AQ86W67 206 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 SYT2Q8N9I0 419 aaPredicted RBP18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 ARNTL2Q8WYA1 636 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 ZNF668Q96K58 619 aaPredicted RBP18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 TIPINQ9BVW5 301 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 POLR3FQ9H1D9 316 aaPredicted RBP18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 TMX1Q9H3N1 280 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 RNF216Q9NWF9 866 aaPredicted RBP18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 KCND2Q9NZV8 630 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 ST3GAL5Q9UNP4 418 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 KIAA1671Q9BY89 1806 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 COL4A6Q14031 1691 aa18.41■□□□□ 0.54
CSGALNACT1-216ENST00000524213 REV3LO60673 3130 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 PRUNE2Q8WUY3 3088 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 CUTAO60888 179 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 SRGAP2CP0DJJ0 459 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 IGFBP4P22692 258 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 PHKA2P46019 1235 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 PCBP1Q15365 356 aaKnown RBP eCLIP18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 FAM102BQ5T8I3 360 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 KCNK18Q7Z418 384 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 RNF149Q8NC42 400 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 SP7Q8TDD2 431 aaPredicted RBP18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 SYMPKQ92797 1274 aaKnown RBP18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 KIFAP3Q92845 792 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 CLIC6Q96NY7 704 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 PLIN2Q99541 437 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 C1orf112Q9NSG2 853 aa18.4■□□□□ 0.54
CSGALNACT1-216ENST00000524213 PLA2G4BP0C869 781 aa18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 ZSCAN20P17040 1043 aaPredicted RBP18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 KARSQ15046 597 aaKnown RBP18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 PPP2R5AQ15172 486 aa18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 MAEAQ7L5Y9 396 aa18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 IFNLR1Q8IU57 520 aaPredicted RBP18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 KSR1Q8IVT5 923 aa18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 EPSTI1Q96J88 318 aa18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 IFT74Q96LB3 600 aa18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 YME1L1Q96TA2 773 aa18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 TSPYL2Q9H2G4 693 aaPredicted RBP18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 IFT122Q9HBG6 1241 aa18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 STK17AQ9UEE5 414 aa18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 MTUS1Q9ULD2 1270 aa18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 FNDC1Q4ZHG4 1894 aaPredicted RBP18.39■□□□□ 0.53
CSGALNACT1-216ENST00000524213 DENND3A2RUS2 1198 aa18.38■□□□□ 0.53
CSGALNACT1-216ENST00000524213 MGEA5O60502 916 aa18.38■□□□□ 0.53
CSGALNACT1-216ENST00000524213 SSBP05455 408 aaKnown RBP eCLIP18.38■□□□□ 0.53
CSGALNACT1-216ENST00000524213 STAG3L1P0CL83 205 aa18.38■□□□□ 0.53
CSGALNACT1-216ENST00000524213 PLCG1P19174 1290 aa18.38■□□□□ 0.53
CSGALNACT1-216ENST00000524213 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
CSGALNACT1-216ENST00000524213 GLRA2P23416 452 aa18.38■□□□□ 0.53
CSGALNACT1-216ENST00000524213 PTENP60484 403 aa18.38■□□□□ 0.53
CSGALNACT1-216ENST00000524213 ERVK-21P61565 698 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms