RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 CT83Q5H943 113 aa7.53□□□□□ -1.2
CPNE3-207ENST00000523588 CCDC62Q6P9F0 684 aa7.53□□□□□ -1.2
CPNE3-207ENST00000523588 LILRA6Q6PI73 481 aa7.53□□□□□ -1.2
CPNE3-207ENST00000523588 PRPF38AQ8NAV1 312 aaKnown RBP7.53□□□□□ -1.2
CPNE3-207ENST00000523588 GFM2Q969S9 779 aaKnown RBP7.53□□□□□ -1.2
CPNE3-207ENST00000523588 NEIL1Q96FI4 390 aaPredicted RBP7.53□□□□□ -1.2
CPNE3-207ENST00000523588 TRIM8Q9BZR9 551 aa7.53□□□□□ -1.2
CPNE3-207ENST00000523588 BRINP2Q9C0B6 783 aa7.53□□□□□ -1.2
CPNE3-207ENST00000523588 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.53□□□□□ -1.2
CPNE3-207ENST00000523588 SLC5A4Q9NY91 659 aa7.53□□□□□ -1.2
CPNE3-207ENST00000523588 NR2E1Q9Y466 385 aa7.53□□□□□ -1.2
CPNE3-207ENST00000523588 C2orf78A6NCI8 922 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 K7ESF4 209 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 FOXD2O60548 495 aaPredicted RBP7.52□□□□□ -1.21
CPNE3-207ENST00000523588 HNRNPLP14866 589 aaKnown RBP eCLIP7.52□□□□□ -1.21
CPNE3-207ENST00000523588 ERVK-21P61565 698 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 SLFN13Q68D06 897 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 NECAB2Q7Z6G3 386 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 CLEC14AQ86T13 490 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 CDYL2Q8N8U2 506 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 RELTQ969Z4 430 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 EAF2Q96CJ1 260 aaPredicted RBP7.52□□□□□ -1.21
CPNE3-207ENST00000523588 AHCYL2Q96HN2 611 aaKnown RBP7.52□□□□□ -1.21
CPNE3-207ENST00000523588 HIST1H2AHQ96KK5 128 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 ACAP3Q96P50 834 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 ORAI2Q96SN7 254 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 HIST1H2AJQ99878 128 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 OSBPL6Q9BZF3 934 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 C14orf119Q9NWQ9 140 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 PRSS50Q9UI38 385 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 FAM184BQ9ULE4 1060 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 SYNPO2Q9UMS6 1093 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 USP18Q9UMW8 372 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 ZNF536O15090 1300 aa7.52□□□□□ -1.21
CPNE3-207ENST00000523588 GOLGA8AA7E2F4 631 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 GOLGA8BA8MQT2 603 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 H2AFYO75367 372 aaKnown RBP7.51□□□□□ -1.21
CPNE3-207ENST00000523588 SEC24DO94855 1032 aaPredicted RBP7.51□□□□□ -1.21
CPNE3-207ENST00000523588 ENPP1P22413 925 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 GPR15P49685 360 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 SCAND1P57086 179 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 RAC3P60763 192 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 ZNF568Q3ZCX4 644 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 LIMS2Q7Z4I7 341 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 OR14K1Q8NGZ2 314 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 ZCRB1Q8TBF4 217 aaKnown RBP7.51□□□□□ -1.21
CPNE3-207ENST00000523588 GAB3Q8WWW8 586 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 RSAD2Q8WXG1 361 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 LMF1Q96S06 567 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 FDXACB1Q9BRP7 624 aaPredicted RBP7.51□□□□□ -1.21
CPNE3-207ENST00000523588 BDH2Q9BUT1 245 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 PUS7LQ9H0K6 701 aaKnown RBP7.51□□□□□ -1.21
CPNE3-207ENST00000523588 JADE2Q9NQC1 790 aa7.51□□□□□ -1.21
CPNE3-207ENST00000523588 GPR42O15529 346 aa7.5□□□□□ -1.21
CPNE3-207ENST00000523588 LPLP06858 475 aa7.5□□□□□ -1.21
CPNE3-207ENST00000523588 ADCY7P51828 1080 aa7.5□□□□□ -1.21
CPNE3-207ENST00000523588 EVA1CP58658 441 aa7.5□□□□□ -1.21
CPNE3-207ENST00000523588 UGT8Q16880 541 aa7.5□□□□□ -1.21
CPNE3-207ENST00000523588 GAREM2Q75VX8 874 aa7.5□□□□□ -1.21
CPNE3-207ENST00000523588 CNTD1Q8N815 330 aa7.5□□□□□ -1.21
CPNE3-207ENST00000523588 LPPQ93052 612 aa7.5□□□□□ -1.21
CPNE3-207ENST00000523588 LRRC37BQ96QE4 947 aa7.5□□□□□ -1.21
CPNE3-207ENST00000523588 KCTD10Q9H3F6 313 aa7.5□□□□□ -1.21
CPNE3-207ENST00000523588 EVLQ9UI08 416 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-207ENST00000523588 NPEPPSL1A6NEC2 478 aa7.49□□□□□ -1.21
CPNE3-207ENST00000523588 KRTAP9-7A8MTY7 169 aa7.49□□□□□ -1.21
CPNE3-207ENST00000523588 GPR3P46089 330 aa7.49□□□□□ -1.21
CPNE3-207ENST00000523588 ADAM8P78325 824 aa7.49□□□□□ -1.21
CPNE3-207ENST00000523588 ATP2C1P98194 919 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-207ENST00000523588 PPARAQ07869 468 aa7.49□□□□□ -1.21
CPNE3-207ENST00000523588 ACAP1Q15027 740 aa7.49□□□□□ -1.21
CPNE3-207ENST00000523588 CCDC178Q5BJE1 867 aa7.49□□□□□ -1.21
CPNE3-207ENST00000523588 TGFBRAP1Q8WUH2 860 aa7.49□□□□□ -1.21
CPNE3-207ENST00000523588 SLC7A6OSQ96CW6 309 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-207ENST00000523588 GNRHR2Q96P88 292 aa7.49□□□□□ -1.21
CPNE3-207ENST00000523588 DPYSL5Q9BPU6 564 aa7.49□□□□□ -1.21
CPNE3-207ENST00000523588 PUF60Q9UHX1 559 aaKnown RBP7.49□□□□□ -1.21
CPNE3-207ENST00000523588 OAZ3Q9UMX2 235 aa7.49□□□□□ -1.21
CPNE3-207ENST00000523588 GAAP10253 952 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 GUCY2FP51841 1108 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 LGALS4P56470 323 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 CD69Q07108 199 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 DUSP8Q13202 625 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 TCIRG1Q13488 830 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 MAN2A1Q16706 1144 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 GLB1LQ6UWU2 654 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 PLA2G15Q8NCC3 412 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 OR14C36Q8NHC7 312 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 MENTQ9BUN1 341 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 SLC6A15Q9H2J7 730 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 EDARQ9UNE0 448 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 RBM8AQ9Y5S9 174 aaKnown RBP7.48□□□□□ -1.21
CPNE3-207ENST00000523588 CDY2AQ9Y6F7 541 aa7.48□□□□□ -1.21
CPNE3-207ENST00000523588 PMS2P1A4D2B8 440 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 SLC26A4O43511 780 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 FSBPO95073 299 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 LY86O95711 162 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 SYN1P17600 705 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 CR2P20023 1033 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 PLP2Q04941 152 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms