RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.59□□□□□ -1.19
CSMD1-211ENST00000523062 OTOFQ9HC10 1997 aa7.59□□□□□ -1.2
CSMD1-211ENST00000523062 RLFQ13129 1914 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 WDR90Q96KV7 1748 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 A0A0G2JLL6 359 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-211ENST00000523062 A0A1W2PQC6 194 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 IQCA1LA6NCM1 817 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 CXCL11O14625 94 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 ARHGAP6O43182 974 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 MTIF2P46199 727 aaKnown RBP7.58□□□□□ -1.2
CSMD1-211ENST00000523062 JAK3P52333 1124 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 PSMC6P62333 389 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 MRPS9P82933 396 aaKnown RBP7.58□□□□□ -1.2
CSMD1-211ENST00000523062 CTBSQ01459 385 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 PPATQ06203 517 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 BAATQ14032 418 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-211ENST00000523062 GIT2Q14161 759 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 CTTNQ14247 550 aaKnown RBP7.58□□□□□ -1.2
CSMD1-211ENST00000523062 TMEM132BQ14DG7 1078 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 ZCWPW2Q504Y3 356 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 HERC4Q5GLZ8 1057 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-211ENST00000523062 ARMC9Q7Z3E5 817 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 PRRT2Q7Z6L0 340 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-211ENST00000523062 NLRX1Q86UT6 975 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 ERO1BQ86YB8 467 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 TPH2Q8IWU9 490 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 PROCA1Q8NCQ7 364 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-211ENST00000523062 CHST13Q8NET6 341 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 NSUN6Q8TEA1 469 aaKnown RBP7.58□□□□□ -1.2
CSMD1-211ENST00000523062 GPRASP2Q96D09 838 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 CCDC51Q96ER9 411 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 PANX2Q96RD6 677 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 REEP2Q9BRK0 252 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 TUBGCP2Q9BSJ2 902 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 RUSC1Q9BVN2 902 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 VPS16Q9H269 839 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 BHMT2Q9H2M3 363 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 TMX1Q9H3N1 280 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 KCNH7Q9NS40 1196 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 TBC1D22BQ9NU19 505 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 NDFIP2Q9NV92 336 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 RGL1Q9NZL6 768 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 KCND2Q9NZV8 630 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 FBXO40Q9UH90 709 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 RIPK3Q9Y572 518 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 PCDHA2Q9Y5H9 948 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 COL4A3BPQ9Y5P4 624 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 LOC285556D6RIA3 1793 aa7.58□□□□□ -1.2
CSMD1-211ENST00000523062 PFASO15067 1338 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 NPHP3-ACAD11A0A0J9YXS1 232 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 ARHGEF35A5YM69 484 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 GLTPD2A6NH11 291 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 KIF2AO00139 706 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 DDX39AO00148 427 aaKnown RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 DHX15O43143 795 aaKnown RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 GRIN3BO60391 1043 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 STX10O60499 249 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 MFAP3LO75121 409 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 STAM2O75886 525 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 SLITRK3O94933 977 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 FAM13AO94988 1023 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 LYPLA2O95372 231 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 P4HBP07237 508 aaKnown RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 MYCLP12524 364 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 PRKCSHP14314 528 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 FGFR3P22607 806 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 SFNP31947 248 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 COPB2P35606 906 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 DNM2P50570 870 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 IRX3P78415 501 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 FKBP3Q00688 224 aaKnown RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 UBXN1Q04323 297 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 ITGB3BPQ13352 177 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 PPIL2Q13356 520 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 PLS1Q14651 629 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 LRRC41Q15345 812 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 GPR162Q16538 588 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 PTPN21Q16825 1174 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 ARSHQ5FYA8 562 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 PRSS36Q5K4E3 855 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 FKBP15Q5T1M5 1219 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 RINT1Q6NUQ1 792 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 LBX2Q6XYB7 198 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 GADL1Q6ZQY3 521 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 LRRC55Q6ZSA7 311 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 SFR1Q86XK3 245 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 CREBRFQ8IUR6 639 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 CNGA4Q8IV77 575 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 CCAR2Q8N163 923 aaKnown RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 PGBD3Q8N328 593 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 TC2NQ8N9U0 490 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 RDM1Q8NG50 284 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 IQCDQ96DY2 449 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 CDHR1Q96JP9 859 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 CEP63Q96MT8 703 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 BAG1Q99933 345 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 LXNQ9BS40 222 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 NAA15Q9BXJ9 866 aaKnown RBP7.57□□□□□ -1.2
CSMD1-211ENST00000523062 ZHX3Q9H4I2 956 aa7.57□□□□□ -1.2
CSMD1-211ENST00000523062 TAF1DQ9H5J8 278 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms