RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ZSWIM6Q9HCJ5 1215 aa17.35■□□□□ 0.37
MRPS28-209ENST00000522987 TSHZ2Q9NRE2 1034 aa17.35■□□□□ 0.37
MRPS28-209ENST00000522987 GJB4Q9NTQ9 266 aa17.35■□□□□ 0.37
MRPS28-209ENST00000522987 CYP46A1Q9Y6A2 500 aa17.35■□□□□ 0.37
MRPS28-209ENST00000522987 WDFY4Q6ZS81 3184 aa17.35■□□□□ 0.37
MRPS28-209ENST00000522987 EML1O00423 815 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 ZC3H11AO75152 810 aaKnown RBP eCLIP17.34■□□□□ 0.37
MRPS28-209ENST00000522987 DEXIO95424 95 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 BCAR1P56945 870 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 EVCP57679 992 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 ZXDAP98168 799 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 KRT17Q04695 432 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 LETM2Q2VYF4 491 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 Q4G0T1 1027 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 XKR3Q5GH77 459 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 TWF2Q6IBS0 349 aaKnown RBP17.34■□□□□ 0.37
MRPS28-209ENST00000522987 KANK3Q6NY19 840 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 TRIM67Q6ZTA4 783 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 ZNF598Q86UK7 904 aaKnown RBP17.34■□□□□ 0.37
MRPS28-209ENST00000522987 SLC39A11Q8N1S5 342 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 SUSD6Q92537 303 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 PBXIP1Q96AQ6 731 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 CDCA3Q99618 268 aaPredicted RBP17.34■□□□□ 0.37
MRPS28-209ENST00000522987 GBP3Q9H0R5 595 aa17.34■□□□□ 0.37
MRPS28-209ENST00000522987 SLKQ9H2G2 1235 aaPredicted RBP17.34■□□□□ 0.37
MRPS28-209ENST00000522987 SUCLA2Q9P2R7 463 aaPredicted RBP17.34■□□□□ 0.37
MRPS28-209ENST00000522987 DDX25Q9UHL0 483 aaKnown RBP17.34■□□□□ 0.37
MRPS28-209ENST00000522987 PIN4Q9Y237 131 aaKnown RBP17.34■□□□□ 0.37
MRPS28-209ENST00000522987 C2orf16Q68DN1 1984 aa17.33■□□□□ 0.37
MRPS28-209ENST00000522987 TDRD15B5MCY1 1934 aaKnown RBP17.33■□□□□ 0.37
MRPS28-209ENST00000522987 A0A0U1RQF3 1178 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 M0R2N6 131 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 PPM1AP35813 382 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 MRE11P49959 708 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 NPEPPSP55786 919 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 CBX2Q14781 532 aaPredicted RBP17.33■□□□□ 0.36
MRPS28-209ENST00000522987 NONOQ15233 471 aaKnown RBP eCLIP17.33■□□□□ 0.36
MRPS28-209ENST00000522987 IER5LQ5T953 404 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 PDE12Q6L8Q7 609 aaKnown RBP17.33■□□□□ 0.36
MRPS28-209ENST00000522987 ZBTB33Q86T24 672 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 TMEM173Q86WV6 379 aaPredicted RBP17.33■□□□□ 0.36
MRPS28-209ENST00000522987 ZNF579Q8NAF0 562 aaKnown RBP17.33■□□□□ 0.36
MRPS28-209ENST00000522987 ETNPPLQ8TBG4 499 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 MFSD14AQ96MC6 490 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 CEP89Q96ST8 783 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 PHOX2BQ99453 314 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 NIFKQ9BYG3 293 aaKnown RBP17.33■□□□□ 0.36
MRPS28-209ENST00000522987 S1PR5Q9H228 398 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 LZTS1Q9Y250 596 aa17.33■□□□□ 0.36
MRPS28-209ENST00000522987 SRGAP2BP0DMP2 458 aa17.32■□□□□ 0.36
MRPS28-209ENST00000522987 PHKA2P46019 1235 aa17.32■□□□□ 0.36
MRPS28-209ENST00000522987 DNM2P50570 870 aa17.32■□□□□ 0.36
MRPS28-209ENST00000522987 KCNC3Q14003 757 aa17.32■□□□□ 0.36
MRPS28-209ENST00000522987 SMC1AQ14683 1233 aaKnown RBP17.32■□□□□ 0.36
MRPS28-209ENST00000522987 B3GNT9Q6UX72 402 aa17.32■□□□□ 0.36
MRPS28-209ENST00000522987 ANO5Q75V66 913 aa17.32■□□□□ 0.36
MRPS28-209ENST00000522987 CATSPER4Q7RTX7 472 aa17.32■□□□□ 0.36
MRPS28-209ENST00000522987 C12orf76Q8N812 135 aaPredicted RBP17.32■□□□□ 0.36
MRPS28-209ENST00000522987 FEZF2Q8TBJ5 459 aa17.32■□□□□ 0.36
MRPS28-209ENST00000522987 NGRNQ9NPE2 291 aaKnown RBP17.32■□□□□ 0.36
MRPS28-209ENST00000522987 PDRG1Q9NUG6 133 aa17.32■□□□□ 0.36
MRPS28-209ENST00000522987 DACT1Q9NYF0 836 aa17.32■□□□□ 0.36
MRPS28-209ENST00000522987 ZDBF2Q9HCK1 2354 aa17.32■□□□□ 0.36
MRPS28-209ENST00000522987 CYP3A7-CYP3A51PA0A087WV96 503 aa17.31■□□□□ 0.36
MRPS28-209ENST00000522987 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.31■□□□□ 0.36
MRPS28-209ENST00000522987 C2orf71A6NGG8 1288 aa17.31■□□□□ 0.36
MRPS28-209ENST00000522987 CXCL14O95715 111 aa17.31■□□□□ 0.36
MRPS28-209ENST00000522987 SFPQP23246 707 aaKnown RBP eCLIP17.31■□□□□ 0.36
MRPS28-209ENST00000522987 CYP3A7P24462 503 aa17.31■□□□□ 0.36
MRPS28-209ENST00000522987 PRSS33Q8NF86 280 aa17.31■□□□□ 0.36
MRPS28-209ENST00000522987 RDM1Q8NG50 284 aa17.31■□□□□ 0.36
MRPS28-209ENST00000522987 OXER1Q8TDS5 423 aa17.31■□□□□ 0.36
MRPS28-209ENST00000522987 BCL7CQ8WUZ0 217 aaPredicted RBP17.31■□□□□ 0.36
MRPS28-209ENST00000522987 ZNF274Q96GC6 653 aaPredicted RBP17.31■□□□□ 0.36
MRPS28-209ENST00000522987 TMEM169Q96HH4 297 aa17.31■□□□□ 0.36
MRPS28-209ENST00000522987 C22orf23Q9BZE7 217 aa17.31■□□□□ 0.36
MRPS28-209ENST00000522987 WRAP73Q9P2S5 460 aaPredicted RBP17.31■□□□□ 0.36
MRPS28-209ENST00000522987 HCFC2Q9Y5Z7 792 aa17.31■□□□□ 0.36
MRPS28-209ENST00000522987 PLXNA3P51805 1871 aa17.31■□□□□ 0.36
MRPS28-209ENST00000522987 IGKV6-21A0A0C4DH24 114 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 CCDC194A0A1B0GVG4 234 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 FAM205CA6NFA0 338 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 B4GALT3O60512 393 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 CLASP2O75122 1294 aaKnown RBP17.3■□□□□ 0.36
MRPS28-209ENST00000522987 EOMESO95936 686 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 ALDH7A1P49419 539 aaKnown RBP17.3■□□□□ 0.36
MRPS28-209ENST00000522987 FOSBP53539 338 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 PSMC5P62195 406 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 SCRN1Q12765 414 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 RARS2Q5T160 578 aaKnown RBP17.3■□□□□ 0.36
MRPS28-209ENST00000522987 CPLX2Q6PUV4 134 aaKnown RBP17.3■□□□□ 0.36
MRPS28-209ENST00000522987 KRT25Q7Z3Z0 450 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 VPS52Q8N1B4 723 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 MRPL43Q8N983 215 aaKnown RBP17.3■□□□□ 0.36
MRPS28-209ENST00000522987 DAGLBQ8NCG7 672 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 TMEM143Q96AN5 459 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 MBOAT7Q96N66 472 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 POMKQ9H5K3 350 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 NRDE2Q9H7Z3 1164 aa17.3■□□□□ 0.36
MRPS28-209ENST00000522987 DNAJB4Q9UDY4 337 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms