RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 TTC8Q8TAM2 541 aa12.14□□□□□ -0.47
LAMA4-219ENST00000522006 DCAF4Q8WV16 495 aa12.14□□□□□ -0.47
LAMA4-219ENST00000522006 SAAL1Q96ER3 474 aa12.14□□□□□ -0.47
LAMA4-219ENST00000522006 GCOM2Q9BZD3 368 aaPredicted RBP12.14□□□□□ -0.47
LAMA4-219ENST00000522006 EIF4E1BA6NMX2 242 aaKnown RBP12.14□□□□□ -0.47
LAMA4-219ENST00000522006 ARFIP2P53365 341 aa12.14□□□□□ -0.47
LAMA4-219ENST00000522006 RNF25Q96BH1 459 aaPredicted RBP12.14□□□□□ -0.47
LAMA4-219ENST00000522006 BTBD6Q96KE9 485 aa12.14□□□□□ -0.47
LAMA4-219ENST00000522006 ZC4H2Q9NQZ6 224 aa12.14□□□□□ -0.47
LAMA4-219ENST00000522006 PYGLP06737 847 aa12.14□□□□□ -0.47
LAMA4-219ENST00000522006 ACTN3Q08043 901 aaPredicted RBP12.14□□□□□ -0.47
LAMA4-219ENST00000522006 RBBP7Q16576 425 aa12.14□□□□□ -0.47
LAMA4-219ENST00000522006 KIAA1755Q5JYT7 1200 aa12.14□□□□□ -0.47
LAMA4-219ENST00000522006 PPP4R4Q6NUP7 873 aa12.14□□□□□ -0.47
LAMA4-219ENST00000522006 GJB4Q9NTQ9 266 aa12.14□□□□□ -0.47
LAMA4-219ENST00000522006 SMARCA1P28370 1054 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 TFDP2Q14188 446 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 LRRC14Q15048 493 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 PPM1NQ8N819 430 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 ICA1LQ8NDH6 482 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 SH3RF3Q8TEJ3 882 aaPredicted RBP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 SNF8Q96H20 258 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 HDAC6Q9UBN7 1215 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 GPC3P51654 580 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 KCNH2Q12809 1159 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 CCNYL1Q8N7R7 359 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 TMEM35BQ8NCS4 154 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 GANCQ8TET4 914 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 SUGT1Q9Y2Z0 365 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 ESYT3A0FGR9 886 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 GTPBP10A4D1E9 387 aaKnown RBP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 MYL3P08590 195 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 THEM5Q8N1Q8 247 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 C11orf70Q9BRQ4 267 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 BBOX1O75936 387 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 DAB2P98082 770 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 POU5F1BQ06416 359 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 PDIA2Q13087 525 aaKnown RBP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 GPS1Q13098 491 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 MTMR1Q13613 665 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 NBPF10Q6P3W6 841 aaKnown RBP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 NAF1Q96HR8 494 aaKnown RBP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 FAM213AQ9BRX8 229 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 INTS2Q9H0H0 1204 aaKnown RBP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 RNF103-CHMP3A0A140T963 221 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 SASH1O94885 1247 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 ZC3H12BQ5HYM0 836 aaKnown RBP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 DHX40Q8IX18 779 aaKnown RBP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 ZBED8Q8IZ13 594 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 DACH2Q96NX9 599 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 TEX12Q9BXU0 123 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 OSBPL1AQ9BXW6 950 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 FAM49AQ9H0Q0 323 aaPredicted RBP12.13□□□□□ -0.47
LAMA4-219ENST00000522006 NDE1Q9NXR1 346 aa12.13□□□□□ -0.47
LAMA4-219ENST00000522006 E9PMD0 336 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 M0QYV0 167 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 KCNA4P22459 653 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 ELF1P32519 619 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 AARSP49588 968 aaKnown RBP eCLIP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 MXD4Q14582 209 aaPredicted RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 PFKFB3Q16875 520 aaPredicted RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 TBC1D10CQ8IV04 446 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 PDCD6IPQ8WUM4 868 aaKnown RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 GPR101Q96P66 508 aaPredicted RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 ZNF341Q9BYN7 854 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 MRFAP1Q9Y605 127 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 ABCB11O95342 1321 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 STK36Q9NRP7 1315 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 USP27XA6NNY8 438 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 CLDN3O15551 220 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 RAD17O75943 681 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 BRAFP15056 766 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 ROR1Q01973 937 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 TNFAIP2Q03169 654 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 AP1B1Q10567 949 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 SLFNL1Q499Z3 407 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 RFX8Q6ZV50 586 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 ATP6V1G3Q96LB4 118 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 TAF1DQ9H5J8 278 aaPredicted RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 CYP4F11Q9HBI6 524 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 IP6K2Q9UHH9 426 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 IGSF1Q8N6C5 1336 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 KRT14P02533 472 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 MCAMP43121 646 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 DYNC1I2Q13409 638 aaKnown RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 TBCCQ15814 346 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 ICE2Q659A1 982 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 CYB5R4Q7L1T6 521 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 XXYLT1Q8NBI6 393 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 SLC13A1Q9BZW2 595 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 NEUROG2Q9H2A3 272 aa12.12□□□□□ -0.47
LAMA4-219ENST00000522006 SARS2Q9NP81 518 aaKnown RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 STX18Q9P2W9 335 aaKnown RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 RPAP1Q9BWH6 1393 aaPredicted RBP12.12□□□□□ -0.47
LAMA4-219ENST00000522006 SLC16A4O15374 487 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms