RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 FDXACB1Q9BRP7 624 aaPredicted RBP23.42■■□□□ 1.34
PABPC1-218ENST00000521865 SLKQ9H2G2 1235 aaPredicted RBP23.42■■□□□ 1.34
PABPC1-218ENST00000521865 SUCLA2Q9P2R7 463 aaPredicted RBP23.42■■□□□ 1.34
PABPC1-218ENST00000521865 FNDC1Q4ZHG4 1894 aaPredicted RBP23.41■■□□□ 1.34
PABPC1-218ENST00000521865 EPB41L2O43491 1005 aaKnown RBP23.41■■□□□ 1.34
PABPC1-218ENST00000521865 ATF7P17544 494 aaPredicted RBP23.41■■□□□ 1.34
PABPC1-218ENST00000521865 ALDH7A1P49419 539 aaKnown RBP23.41■■□□□ 1.34
PABPC1-218ENST00000521865 SMC1AQ14683 1233 aaKnown RBP23.41■■□□□ 1.34
PABPC1-218ENST00000521865 CBX2Q14781 532 aaPredicted RBP23.41■■□□□ 1.34
PABPC1-218ENST00000521865 INF2Q27J81 1249 aa23.41■■□□□ 1.34
PABPC1-218ENST00000521865 LETM2Q2VYF4 491 aa23.41■■□□□ 1.34
PABPC1-218ENST00000521865 LONRF3Q496Y0 759 aa23.41■■□□□ 1.34
PABPC1-218ENST00000521865 TWF2Q6IBS0 349 aaKnown RBP23.41■■□□□ 1.34
PABPC1-218ENST00000521865 MOXD1Q6UVY6 613 aa23.41■■□□□ 1.34
PABPC1-218ENST00000521865 TRIM67Q6ZTA4 783 aa23.41■■□□□ 1.34
PABPC1-218ENST00000521865 ZNF598Q86UK7 904 aaKnown RBP23.41■■□□□ 1.34
PABPC1-218ENST00000521865 DAGLBQ8NCG7 672 aa23.41■■□□□ 1.34
PABPC1-218ENST00000521865 ETNPPLQ8TBG4 499 aa23.41■■□□□ 1.34
PABPC1-218ENST00000521865 INO80BQ9C086 356 aaPredicted RBP23.41■■□□□ 1.34
PABPC1-218ENST00000521865 KCNH6Q9H252 994 aa23.41■■□□□ 1.34
PABPC1-218ENST00000521865 CHST12Q9NRB3 414 aa23.41■■□□□ 1.34
PABPC1-218ENST00000521865 PDRG1Q9NUG6 133 aa23.41■■□□□ 1.34
PABPC1-218ENST00000521865 PIN4Q9Y237 131 aaKnown RBP23.41■■□□□ 1.34
PABPC1-218ENST00000521865 MYH9P35579 1960 aaKnown RBP23.4■■□□□ 1.34
PABPC1-218ENST00000521865 TMEM221A6NGB7 291 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 NT5C1B-RDH14C9J2C7 533 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 M0R296 226 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 PSMC5P62195 406 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 BMS1Q14692 1282 aaKnown RBP23.4■■□□□ 1.34
PABPC1-218ENST00000521865 TMEM184AQ6ZMB5 413 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 SLC39A11Q8N1S5 342 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 TMEM87AQ8NBN3 555 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 SUSD6Q92537 303 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 PBXIP1Q96AQ6 731 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 TMEM169Q96HH4 297 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 NLRP4Q96MN2 994 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 TM6SF1Q9BZW5 370 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 KCNJ14Q9UNX9 436 aa23.4■■□□□ 1.34
PABPC1-218ENST00000521865 CCDC194A0A1B0GVG4 234 aa23.39■■□□□ 1.33
PABPC1-218ENST00000521865 M0R2N6 131 aa23.39■■□□□ 1.33
PABPC1-218ENST00000521865 CDKL5O76039 1030 aa23.39■■□□□ 1.33
PABPC1-218ENST00000521865 PHKA2P46019 1235 aa23.39■■□□□ 1.33
PABPC1-218ENST00000521865 BCAR1P56945 870 aa23.39■■□□□ 1.33
PABPC1-218ENST00000521865 ZXDAP98168 799 aa23.39■■□□□ 1.33
PABPC1-218ENST00000521865 PLA2G4FQ68DD2 849 aa23.39■■□□□ 1.33
PABPC1-218ENST00000521865 B3GNT9Q6UX72 402 aa23.39■■□□□ 1.33
PABPC1-218ENST00000521865 CATSPER4Q7RTX7 472 aa23.39■■□□□ 1.33
PABPC1-218ENST00000521865 ZNF410Q86VK4 478 aa23.39■■□□□ 1.33
PABPC1-218ENST00000521865 FAM177A1Q8N128 213 aaPredicted RBP23.39■■□□□ 1.33
PABPC1-218ENST00000521865 CASP10Q92851 521 aa23.39■■□□□ 1.33
PABPC1-218ENST00000521865 JPH2Q9BR39 696 aaPredicted RBP23.39■■□□□ 1.33
PABPC1-218ENST00000521865 MUC6Q6W4X9 2439 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 IGKV6-21A0A0C4DH24 114 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 SLC37A4O43826 429 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 MARCH6O60337 910 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 ZC3H11AO75152 810 aaKnown RBP eCLIP23.38■■□□□ 1.33
PABPC1-218ENST00000521865 MAFO75444 373 aaPredicted RBP23.38■■□□□ 1.33
PABPC1-218ENST00000521865 STBD1O95210 358 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 SKIP12755 728 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 XBP1P17861 261 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 SP100P23497 879 aaPredicted RBP23.38■■□□□ 1.33
PABPC1-218ENST00000521865 KCNC3Q14003 757 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 ZBTB33Q86T24 672 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 KSR1Q8IVT5 923 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 SUGP1Q8IWZ8 645 aaKnown RBP23.38■■□□□ 1.33
PABPC1-218ENST00000521865 LPPQ93052 612 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 MBOAT7Q96N66 472 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 CEP89Q96ST8 783 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 S1PR5Q9H228 398 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 INPP5FQ9Y2H2 1132 aa23.38■■□□□ 1.33
PABPC1-218ENST00000521865 DKC1O60832 514 aaKnown RBP eCLIP23.37■■□□□ 1.33
PABPC1-218ENST00000521865 HOXB8P17481 243 aaPredicted RBP23.37■■□□□ 1.33
PABPC1-218ENST00000521865 NHLH1Q02575 133 aa23.37■■□□□ 1.33
PABPC1-218ENST00000521865 NPY5RQ15761 445 aa23.37■■□□□ 1.33
PABPC1-218ENST00000521865 TPRNQ4KMQ1 711 aa23.37■■□□□ 1.33
PABPC1-218ENST00000521865 SYCE2Q6PIF2 218 aa23.37■■□□□ 1.33
PABPC1-218ENST00000521865 GLB1LQ6UWU2 654 aa23.37■■□□□ 1.33
PABPC1-218ENST00000521865 ANO5Q75V66 913 aa23.37■■□□□ 1.33
PABPC1-218ENST00000521865 MRPL43Q8N983 215 aaKnown RBP23.37■■□□□ 1.33
PABPC1-218ENST00000521865 SLC7A3Q8WY07 619 aa23.37■■□□□ 1.33
PABPC1-218ENST00000521865 TSHZ2Q9NRE2 1034 aa23.37■■□□□ 1.33
PABPC1-218ENST00000521865 C2orf71A6NGG8 1288 aa23.36■■□□□ 1.33
PABPC1-218ENST00000521865 EML1O00423 815 aa23.36■■□□□ 1.33
PABPC1-218ENST00000521865 CXCL14O95715 111 aa23.36■■□□□ 1.33
PABPC1-218ENST00000521865 QARSP47897 775 aaKnown RBP23.36■■□□□ 1.33
PABPC1-218ENST00000521865 RNASELQ05823 741 aaKnown RBP23.36■■□□□ 1.33
PABPC1-218ENST00000521865 CES5AQ6NT32 575 aa23.36■■□□□ 1.33
PABPC1-218ENST00000521865 NEK8Q86SG6 692 aa23.36■■□□□ 1.33
PABPC1-218ENST00000521865 CYP26B1Q9NR63 512 aa23.36■■□□□ 1.33
PABPC1-218ENST00000521865 FAM105AQ9NUU6 356 aa23.36■■□□□ 1.33
PABPC1-218ENST00000521865 HCFC2Q9Y5Z7 792 aa23.36■■□□□ 1.33
PABPC1-218ENST00000521865 CCNT1O60563 726 aaKnown RBP23.35■■□□□ 1.33
PABPC1-218ENST00000521865 RAB27AP51159 221 aa23.35■■□□□ 1.33
PABPC1-218ENST00000521865 POLGP54098 1239 aaPredicted RBP23.35■■□□□ 1.33
PABPC1-218ENST00000521865 SCRN1Q12765 414 aa23.35■■□□□ 1.33
PABPC1-218ENST00000521865 BMP8AQ7Z5Y6 402 aa23.35■■□□□ 1.33
PABPC1-218ENST00000521865 VPS52Q8N1B4 723 aa23.35■■□□□ 1.33
PABPC1-218ENST00000521865 RSPH1Q8WYR4 309 aa23.35■■□□□ 1.33
PABPC1-218ENST00000521865 CEP170P1Q96L14 293 aa23.35■■□□□ 1.33
PABPC1-218ENST00000521865 FAM20AQ96MK3 541 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms