RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 CPVLQ9H3G5 476 aa8.79□□□□□ -1
HMBOX1-208ENST00000521516 MRPS17Q9Y2R5 130 aaKnown RBP8.79□□□□□ -1
HMBOX1-208ENST00000521516 PCDHA1Q9Y5I3 950 aa8.79□□□□□ -1
HMBOX1-208ENST00000521516 M0R2C6 588 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 IPO8O15397 1037 aaKnown RBP8.78□□□□□ -1
HMBOX1-208ENST00000521516 FIBPO43427 364 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 STAM2O75886 525 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 EPN2O95208 641 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 FGRP09769 529 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 PLA2G2AP14555 144 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 INSRRP14616 1297 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 MARK3P27448 753 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 TCF7P36402 384 aaPredicted RBP8.78□□□□□ -1
HMBOX1-208ENST00000521516 IGBP1P78318 339 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 MRPS9P82933 396 aaKnown RBP8.78□□□□□ -1
HMBOX1-208ENST00000521516 QRICH1Q2TAL8 776 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 ZNF852Q6ZMS4 543 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 TPRG1Q6ZUI0 275 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 TMEM57Q8N5G2 664 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 ST13P5Q8NFI4 369 aaPredicted RBP8.78□□□□□ -1
HMBOX1-208ENST00000521516 BCL7CQ8WUZ0 217 aaPredicted RBP8.78□□□□□ -1
HMBOX1-208ENST00000521516 UBA5Q9GZZ9 404 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 ARRDC1-AS1Q9H2J1 176 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 DOCK5Q9H7D0 1870 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 RANBP6O60518 1105 aaKnown RBP8.78□□□□□ -1
HMBOX1-208ENST00000521516 CEACAM1P13688 526 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 RNF43Q68DV7 783 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 CEP85Q6P2H3 762 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 GET4Q7L5D6 327 aaPredicted RBP8.78□□□□□ -1
HMBOX1-208ENST00000521516 LONP2Q86WA8 852 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 KIF1BPQ96EK5 621 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 MRPL9Q9BYD2 267 aaKnown RBP8.78□□□□□ -1
HMBOX1-208ENST00000521516 NAPBQ9H115 298 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 CDHR5Q9HBB8 845 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 DPP7Q9UHL4 492 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 FRMPD4Q14CM0 1322 aa8.78□□□□□ -1
HMBOX1-208ENST00000521516 GSTTP1A0A1W2PQM5 241 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 FAM221BA6H8Z2 402 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 CHURC1-FNTBB4DL54 471 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 RFPL2O75678 378 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 PAPSS2O95340 614 aaPredicted RBP8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 GOLGA8HP0CJ92 632 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 CSRP1P21291 193 aaKnown RBP8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 FNTBP49356 437 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 SH3PXD2AQ5TCZ1 1133 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 MTSS1LQ765P7 747 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 FAM228AQ86W67 206 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 ECHDC2Q86YB7 292 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 ADGRF4Q8IZF3 695 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 HDAC7Q8WUI4 952 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 SMARCAD1Q9H4L7 1026 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 ANAPC4Q9UJX5 808 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 RNF113AO15541 343 aaKnown RBP8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 C1QL1O75973 258 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 F5P12259 2224 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 RAP1GAPP47736 663 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 SATB1Q01826 763 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 CTDSPL2Q05D32 466 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 ELMSAN1Q6PJG2 1045 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 ZNF598Q86UK7 904 aaKnown RBP8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 KBTBD3Q8NAB2 608 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 SEPT1Q8WYJ6 367 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 TTC14Q96N46 770 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 STK39Q9UEW8 545 aa8.77□□□□□ -1.01
HMBOX1-208ENST00000521516 AXIN1O15169 862 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 C1RP00736 705 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 HOXA13P31271 388 aaPredicted RBP8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 CXCL12P48061 93 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 SP4Q02446 784 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 PIK3R5Q8WYR1 880 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 RSPH1Q8WYR4 309 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 PHKBQ93100 1093 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 NT5C3AQ9H0P0 336 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 KLK13Q9UKR3 277 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 CDH7Q9ULB5 785 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 PCDHGA5Q9Y5G8 931 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 ASXL3Q9C0F0 2248 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 K7ESF4 209 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 HYAL3O43820 417 aaPredicted RBP8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 ZFYP08048 801 aaPredicted RBP8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 GIMAP8Q8ND71 665 aaPredicted RBP8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 ZDHHC7Q9NXF8 308 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 RAI2Q9Y5P3 530 aa8.76□□□□□ -1.01
HMBOX1-208ENST00000521516 CELSR3Q9NYQ7 3312 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 SDK1Q7Z5N4 2213 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 TK2O00142 265 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 FOXP2O15409 715 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 GALTP07902 379 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 HOXA6P31267 233 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 MTHFD1LQ6UB35 978 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 CEP68Q76N32 757 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 KIAA0319LQ8IZA0 1049 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 HELQQ8TDG4 1101 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 TRAPPC12Q8WVT3 735 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 PCYT2Q99447 389 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 PRKD2Q9BZL6 878 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 JMJD4Q9H9V9 463 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 SCUBE2Q9NQ36 999 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 VPS45Q9NRW7 570 aa8.75□□□□□ -1.01
HMBOX1-208ENST00000521516 GINS2Q9Y248 185 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms