RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 SLFN12Q8IYM2 578 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 NSUN7Q8NE18 718 aaKnown RBP17.72■□□□□ 0.43
CLN8-205ENST00000520991 CASD1Q96PB1 797 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 FDXACB1Q9BRP7 624 aaPredicted RBP17.72■□□□□ 0.43
CLN8-205ENST00000520991 LXNQ9BS40 222 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 CWH43Q9H720 699 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 TLR9Q9NR96 1032 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 A0A0U1RQF3 1178 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 JAK2O60674 1132 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 EOMESO95936 686 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
CLN8-205ENST00000520991 NRIP1P48552 1158 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 ADAM15Q13444 863 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 EXOC8Q8IYI6 725 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 EFHBQ8N7U6 833 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 KHSRPQ92945 711 aaKnown RBP eCLIP17.72■□□□□ 0.43
CLN8-205ENST00000520991 TLE6Q9H808 572 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 CHST12Q9NRB3 414 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 RNF19AQ9NV58 838 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 PRKAG3Q9UGI9 489 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 CD207Q9UJ71 328 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 PPME1Q9Y570 386 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 PCDHGC5Q9Y5F6 944 aa17.72■□□□□ 0.43
CLN8-205ENST00000520991 YWHABP31946 246 aaKnown RBP17.71■□□□□ 0.42
CLN8-205ENST00000520991 PPM1AP35813 382 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 RFC5P40937 340 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 SMAD4Q13485 552 aaKnown RBP17.71■□□□□ 0.42
CLN8-205ENST00000520991 TWF2Q6IBS0 349 aaKnown RBP17.71■□□□□ 0.42
CLN8-205ENST00000520991 LRRC55Q6ZSA7 311 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 OTUD6AQ7L8S5 288 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 CATSPER4Q7RTX7 472 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 KSR1Q8IVT5 923 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 C4orf19Q8IY42 314 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 HELQQ8TDG4 1101 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 TNFRSF25Q93038 417 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 DYDC2Q96IM9 177 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 ZNF558Q96NG5 402 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 ZSWIM4Q9H7M6 989 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 RGL1Q9NZL6 768 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 WRAP73Q9P2S5 460 aaPredicted RBP17.71■□□□□ 0.42
CLN8-205ENST00000520991 PUF60Q9UHX1 559 aaKnown RBP17.71■□□□□ 0.42
CLN8-205ENST00000520991 PIN4Q9Y237 131 aaKnown RBP17.71■□□□□ 0.42
CLN8-205ENST00000520991 COL4A3BPQ9Y5P4 624 aa17.71■□□□□ 0.42
CLN8-205ENST00000520991 BTBD18B2RXH4 712 aa17.7■□□□□ 0.42
CLN8-205ENST00000520991 MBTPS2O43462 519 aa17.7■□□□□ 0.42
CLN8-205ENST00000520991 SEC24BO95487 1268 aa17.7■□□□□ 0.42
CLN8-205ENST00000520991 CYP4A11Q02928 519 aa17.7■□□□□ 0.42
CLN8-205ENST00000520991 ZP2Q05996 745 aa17.7■□□□□ 0.42
CLN8-205ENST00000520991 CALCRLQ16602 461 aa17.7■□□□□ 0.42
CLN8-205ENST00000520991 TMEM31Q5JXX7 168 aa17.7■□□□□ 0.42
CLN8-205ENST00000520991 CLLU1OSQ5K130 101 aa17.7■□□□□ 0.42
CLN8-205ENST00000520991 PDE12Q6L8Q7 609 aaKnown RBP17.7■□□□□ 0.42
CLN8-205ENST00000520991 KCNT2Q6UVM3 1135 aa17.7■□□□□ 0.42
CLN8-205ENST00000520991 ADHFE1Q8IWW8 467 aa17.7■□□□□ 0.42
CLN8-205ENST00000520991 DIS3L2Q8IYB7 885 aaKnown RBP17.7■□□□□ 0.42
CLN8-205ENST00000520991 ZNF579Q8NAF0 562 aaKnown RBP17.7■□□□□ 0.42
CLN8-205ENST00000520991 PSPC1Q8WXF1 523 aaKnown RBP17.7■□□□□ 0.42
CLN8-205ENST00000520991 MRPL9Q9BYD2 267 aaKnown RBP17.7■□□□□ 0.42
CLN8-205ENST00000520991 ENTPD7Q9NQZ7 604 aa17.7■□□□□ 0.42
CLN8-205ENST00000520991 BMP2KQ9NSY1 1161 aaPredicted RBP17.7■□□□□ 0.42
CLN8-205ENST00000520991 C5orf42Q9H799 3197 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 FSD2A1L4K1 749 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 PI4K2BG5E9Z4 385 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 GAS2O43903 313 aaKnown RBP17.69■□□□□ 0.42
CLN8-205ENST00000520991 SKIP12755 728 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 ATF7P17544 494 aaPredicted RBP17.69■□□□□ 0.42
CLN8-205ENST00000520991 PBX3P40426 434 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 PHKA2P46019 1235 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 ERVFC1P60507 584 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 PLCB3Q01970 1234 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 KRT17Q04695 432 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 SPIRE1Q08AE8 756 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 CTTNQ14247 550 aaKnown RBP17.69■□□□□ 0.42
CLN8-205ENST00000520991 SMAD2Q15796 467 aaKnown RBP17.69■□□□□ 0.42
CLN8-205ENST00000520991 XKR9Q5GH70 373 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 PLPP4Q5VZY2 271 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 ZNF598Q86UK7 904 aaKnown RBP17.69■□□□□ 0.42
CLN8-205ENST00000520991 TPH2Q8IWU9 490 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 PRPF31Q8WWY3 499 aaKnown RBP17.69■□□□□ 0.42
CLN8-205ENST00000520991 MRPS27Q92552 414 aaKnown RBP17.69■□□□□ 0.42
CLN8-205ENST00000520991 TMEM143Q96AN5 459 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 POP1Q99575 1024 aaKnown RBP17.69■□□□□ 0.42
CLN8-205ENST00000520991 DHX33Q9H6R0 707 aaKnown RBP17.69■□□□□ 0.42
CLN8-205ENST00000520991 PCDHA12Q9UN75 941 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 LZTS1Q9Y250 596 aa17.69■□□□□ 0.42
CLN8-205ENST00000520991 PER2O15055 1255 aa17.68■□□□□ 0.42
CLN8-205ENST00000520991 NEMFO60524 1076 aa17.68■□□□□ 0.42
CLN8-205ENST00000520991 SRGAP2CP0DJJ0 459 aa17.68■□□□□ 0.42
CLN8-205ENST00000520991 EMC2Q15006 297 aa17.68■□□□□ 0.42
CLN8-205ENST00000520991 SAFBQ15424 915 aaKnown RBP eCLIP17.68■□□□□ 0.42
CLN8-205ENST00000520991 TCP11Q8WWU5 503 aa17.68■□□□□ 0.42
CLN8-205ENST00000520991 MSLNLQ96KJ4 702 aa17.68■□□□□ 0.42
CLN8-205ENST00000520991 CDCA3Q99618 268 aaPredicted RBP17.68■□□□□ 0.42
CLN8-205ENST00000520991 TCF25Q9BQ70 676 aa17.68■□□□□ 0.42
CLN8-205ENST00000520991 EIF2AK1Q9BQI3 630 aaKnown RBP17.68■□□□□ 0.42
CLN8-205ENST00000520991 TRAIPQ9BWF2 469 aa17.68■□□□□ 0.42
CLN8-205ENST00000520991 SPG21Q9NZD8 308 aa17.68■□□□□ 0.42
CLN8-205ENST00000520991 BARX2Q9UMQ3 279 aaPredicted RBP17.68■□□□□ 0.42
CLN8-205ENST00000520991 LIMCH1Q9UPQ0 1083 aa17.68■□□□□ 0.42
CLN8-205ENST00000520991 FAM86C2PA6NEL3 165 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms