RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 FAM20AQ96MK3 541 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 ZNF558Q96NG5 402 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 KCNMB3Q9NPA1 279 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 CHST12Q9NRB3 414 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 SUCLA2Q9P2R7 463 aaPredicted RBP22.06■■□□□ 1.12
PABPC1-215ENST00000520804 VAV3Q9UKW4 847 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 C5orf42Q9H799 3197 aa22.05■■□□□ 1.12
PABPC1-215ENST00000520804 A0A087WZ62 844 aa22.05■■□□□ 1.12
PABPC1-215ENST00000520804 GCFC2P16383 781 aaKnown RBP22.05■■□□□ 1.12
PABPC1-215ENST00000520804 ATF7P17544 494 aaPredicted RBP22.05■■□□□ 1.12
PABPC1-215ENST00000520804 PPM1AP35813 382 aa22.05■■□□□ 1.12
PABPC1-215ENST00000520804 ZNF410Q86VK4 478 aa22.05■■□□□ 1.12
PABPC1-215ENST00000520804 VN1R2Q8NFZ6 395 aa22.05■■□□□ 1.12
PABPC1-215ENST00000520804 FDXACB1Q9BRP7 624 aaPredicted RBP22.05■■□□□ 1.12
PABPC1-215ENST00000520804 GJB4Q9NTQ9 266 aa22.05■■□□□ 1.12
PABPC1-215ENST00000520804 NEFLP07196 543 aa22.04■■□□□ 1.12
PABPC1-215ENST00000520804 SFPQP23246 707 aaKnown RBP eCLIP22.04■■□□□ 1.12
PABPC1-215ENST00000520804 PBX3P40426 434 aa22.04■■□□□ 1.12
PABPC1-215ENST00000520804 QARSP47897 775 aaKnown RBP22.04■■□□□ 1.12
PABPC1-215ENST00000520804 RBM10P98175 930 aaKnown RBP22.04■■□□□ 1.12
PABPC1-215ENST00000520804 PLPP4Q5VZY2 271 aa22.04■■□□□ 1.12
PABPC1-215ENST00000520804 PLA2G4FQ68DD2 849 aa22.04■■□□□ 1.12
PABPC1-215ENST00000520804 RHPN2Q8IUC4 686 aa22.04■■□□□ 1.12
PABPC1-215ENST00000520804 RNF135Q8IUD6 432 aa22.04■■□□□ 1.12
PABPC1-215ENST00000520804 HELQQ8TDG4 1101 aa22.04■■□□□ 1.12
PABPC1-215ENST00000520804 TCF25Q9BQ70 676 aa22.04■■□□□ 1.12
PABPC1-215ENST00000520804 JPH2Q9BR39 696 aaPredicted RBP22.04■■□□□ 1.12
PABPC1-215ENST00000520804 INO80BQ9C086 356 aaPredicted RBP22.04■■□□□ 1.12
PABPC1-215ENST00000520804 NGRNQ9NPE2 291 aaKnown RBP22.04■■□□□ 1.12
PABPC1-215ENST00000520804 USP15Q9Y4E8 981 aaPredicted RBP22.04■■□□□ 1.12
PABPC1-215ENST00000520804 DKC1O60832 514 aaKnown RBP eCLIP22.03■■□□□ 1.12
PABPC1-215ENST00000520804 DTNBO60941 627 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 CTDNEP1O95476 244 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 ANAPC15P60006 121 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 KRT17Q04695 432 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 KCNC3Q14003 757 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 HERC4Q5GLZ8 1057 aaPredicted RBP22.03■■□□□ 1.12
PABPC1-215ENST00000520804 PIK3AP1Q6ZUJ8 805 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 OXER1Q8TDS5 423 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 TRAIPQ9BWF2 469 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 ENTPD7Q9NQZ7 604 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 CYP26B1Q9NR63 512 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 SPG21Q9NZD8 308 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 MUTYHQ9UIF7 546 aa22.03■■□□□ 1.12
PABPC1-215ENST00000520804 TBX3O15119 743 aa22.02■■□□□ 1.12
PABPC1-215ENST00000520804 CCNT1O60563 726 aaKnown RBP22.02■■□□□ 1.12
PABPC1-215ENST00000520804 P4HBP07237 508 aaKnown RBP22.02■■□□□ 1.12
PABPC1-215ENST00000520804 PHKA2P46019 1235 aa22.02■■□□□ 1.12
PABPC1-215ENST00000520804 ANKRD1Q15327 319 aa22.02■■□□□ 1.12
PABPC1-215ENST00000520804 TMEM184AQ6ZMB5 413 aa22.02■■□□□ 1.12
PABPC1-215ENST00000520804 KSR1Q8IVT5 923 aa22.02■■□□□ 1.12
PABPC1-215ENST00000520804 SLC39A11Q8N1S5 342 aa22.02■■□□□ 1.12
PABPC1-215ENST00000520804 HAS1Q92839 578 aa22.02■■□□□ 1.12
PABPC1-215ENST00000520804 NLRP4Q96MN2 994 aa22.02■■□□□ 1.12
PABPC1-215ENST00000520804 NAP1L4Q99733 375 aaKnown RBP22.02■■□□□ 1.12
PABPC1-215ENST00000520804 MRPL9Q9BYD2 267 aaKnown RBP22.02■■□□□ 1.12
PABPC1-215ENST00000520804 HIDE1A8MVS5 230 aa22.01■■□□□ 1.11
PABPC1-215ENST00000520804 LOC730098B7Z3J9 87 aa22.01■■□□□ 1.11
PABPC1-215ENST00000520804 SRGAP2BP0DMP2 458 aa22.01■■□□□ 1.11
PABPC1-215ENST00000520804 SKIP12755 728 aa22.01■■□□□ 1.11
PABPC1-215ENST00000520804 AK2P54819 239 aa22.01■■□□□ 1.11
PABPC1-215ENST00000520804 NPEPPSP55786 919 aa22.01■■□□□ 1.11
PABPC1-215ENST00000520804 TWF2Q6IBS0 349 aaKnown RBP22.01■■□□□ 1.11
PABPC1-215ENST00000520804 RSPH1Q8WYR4 309 aa22.01■■□□□ 1.11
PABPC1-215ENST00000520804 WASF1Q92558 559 aa22.01■■□□□ 1.11
PABPC1-215ENST00000520804 WRAP73Q9P2S5 460 aaPredicted RBP22.01■■□□□ 1.11
PABPC1-215ENST00000520804 ORC3Q9UBD5 711 aaPredicted RBP22.01■■□□□ 1.11
PABPC1-215ENST00000520804 PIN4Q9Y237 131 aaKnown RBP22.01■■□□□ 1.11
PABPC1-215ENST00000520804 EPHA7Q15375 998 aa22■■□□□ 1.11
PABPC1-215ENST00000520804 EARS2Q5JPH6 523 aaKnown RBP22■■□□□ 1.11
PABPC1-215ENST00000520804 TMC7Q7Z402 723 aa22■■□□□ 1.11
PABPC1-215ENST00000520804 ZNF579Q8NAF0 562 aaKnown RBP22■■□□□ 1.11
PABPC1-215ENST00000520804 SLC7A3Q8WY07 619 aa22■■□□□ 1.11
PABPC1-215ENST00000520804 SUSD6Q92537 303 aa22■■□□□ 1.11
PABPC1-215ENST00000520804 CEP170P1Q96L14 293 aa22■■□□□ 1.11
PABPC1-215ENST00000520804 PHF7Q9BWX1 381 aaPredicted RBP22■■□□□ 1.11
PABPC1-215ENST00000520804 DHX33Q9H6R0 707 aaKnown RBP22■■□□□ 1.11
PABPC1-215ENST00000520804 IFT122Q9HBG6 1241 aa22■■□□□ 1.11
PABPC1-215ENST00000520804 PPME1Q9Y570 386 aa22■■□□□ 1.11
PABPC1-215ENST00000520804 MARCH6O60337 910 aa21.99■■□□□ 1.11
PABPC1-215ENST00000520804 BCAR1P56945 870 aa21.99■■□□□ 1.11
PABPC1-215ENST00000520804 CBX2Q14781 532 aaPredicted RBP21.99■■□□□ 1.11
PABPC1-215ENST00000520804 ANKRD54Q6NXT1 300 aa21.99■■□□□ 1.11
PABPC1-215ENST00000520804 CATSPER4Q7RTX7 472 aa21.99■■□□□ 1.11
PABPC1-215ENST00000520804 POTEDQ86YR6 584 aa21.99■■□□□ 1.11
PABPC1-215ENST00000520804 C4orf19Q8IY42 314 aa21.99■■□□□ 1.11
PABPC1-215ENST00000520804 EXOC8Q8IYI6 725 aa21.99■■□□□ 1.11
PABPC1-215ENST00000520804 FAM105AQ9NUU6 356 aa21.99■■□□□ 1.11
PABPC1-215ENST00000520804 COL4A3BPQ9Y5P4 624 aa21.99■■□□□ 1.11
PABPC1-215ENST00000520804 ZNF623O75123 536 aa21.98■■□□□ 1.11
PABPC1-215ENST00000520804 FDPSP14324 419 aaKnown RBP21.98■■□□□ 1.11
PABPC1-215ENST00000520804 RFC5P40937 340 aa21.98■■□□□ 1.11
PABPC1-215ENST00000520804 TECP42680 631 aa21.98■■□□□ 1.11
PABPC1-215ENST00000520804 ALDH7A1P49419 539 aaKnown RBP21.98■■□□□ 1.11
PABPC1-215ENST00000520804 POLGP54098 1239 aaPredicted RBP21.98■■□□□ 1.11
PABPC1-215ENST00000520804 SMC1AQ14683 1233 aaKnown RBP21.98■■□□□ 1.11
PABPC1-215ENST00000520804 MRPL43Q8N983 215 aaKnown RBP21.98■■□□□ 1.11
PABPC1-215ENST00000520804 LPPQ93052 612 aa21.98■■□□□ 1.11
PABPC1-215ENST00000520804 LXNQ9BS40 222 aa21.98■■□□□ 1.11
PABPC1-215ENST00000520804 S1PR5Q9H228 398 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms