RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 SMAD3P84022 425 aaKnown RBP6.9□□□□□ -1.3
LINC00535-204ENST00000520513 EIF4HQ15056 248 aaKnown RBP6.9□□□□□ -1.3
LINC00535-204ENST00000520513 TTF1Q15361 905 aaPredicted RBP6.9□□□□□ -1.3
LINC00535-204ENST00000520513 TRIM68Q6AZZ1 485 aa6.9□□□□□ -1.3
LINC00535-204ENST00000520513 CRIP3Q6Q6R5 217 aa6.9□□□□□ -1.3
LINC00535-204ENST00000520513 Q6ZSN1 163 aa6.9□□□□□ -1.3
LINC00535-204ENST00000520513 HDGFL2Q7Z4V5 671 aaPredicted RBP6.9□□□□□ -1.3
LINC00535-204ENST00000520513 NME9Q86XW9 330 aa6.9□□□□□ -1.3
LINC00535-204ENST00000520513 BCL6BQ8N143 479 aaPredicted RBP6.9□□□□□ -1.3
LINC00535-204ENST00000520513 ZNF610Q8N9Z0 462 aa6.9□□□□□ -1.3
LINC00535-204ENST00000520513 SLC16A11Q8NCK7 471 aa6.9□□□□□ -1.3
LINC00535-204ENST00000520513 COG1Q8WTW3 980 aa6.9□□□□□ -1.3
LINC00535-204ENST00000520513 GBP4Q96PP9 640 aa6.9□□□□□ -1.3
LINC00535-204ENST00000520513 ELF4Q99607 663 aaPredicted RBP6.9□□□□□ -1.3
LINC00535-204ENST00000520513 ZNF747Q9BV97 191 aa6.9□□□□□ -1.3
LINC00535-204ENST00000520513 BTBD2Q9BX70 525 aa6.9□□□□□ -1.3
LINC00535-204ENST00000520513 H2AFY2Q9P0M6 372 aaPredicted RBP6.9□□□□□ -1.3
LINC00535-204ENST00000520513 USP36Q9P275 1121 aaKnown RBP6.9□□□□□ -1.3
LINC00535-204ENST00000520513 TESMINQ9Y4I5 508 aa6.9□□□□□ -1.3
LINC00535-204ENST00000520513 MYO15BQ96JP2 1530 aa6.9□□□□□ -1.31
LINC00535-204ENST00000520513 PRAMEF22A3QJZ6 481 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 DVL2O14641 736 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 SLC9A1P19634 815 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 CD40P25942 277 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 NEK2P51955 445 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 EPHA7Q15375 998 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 TERF2Q15554 542 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 BROXQ5VW32 411 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 RASSF3Q86WH2 238 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 CLRN3Q8NCR9 226 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 AHCYL2Q96HN2 611 aaKnown RBP6.89□□□□□ -1.31
LINC00535-204ENST00000520513 TRIM8Q9BZR9 551 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 TOMM22Q9NS69 142 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 TCEAL9Q9UHQ7 104 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 TRHDEQ9UKU6 1024 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 OAZ3Q9UMX2 235 aa6.89□□□□□ -1.31
LINC00535-204ENST00000520513 WASHC2AQ641Q2 1341 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 E2F8A0AVK6 867 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 PLSCR1O15162 318 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 FOXP2O15409 715 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 FSHBP01225 129 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 HMGCRP04035 888 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 RAC3P60763 192 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 ADCY1Q08828 1119 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 PCOLCEQ15113 449 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 HS1BP3Q53T59 392 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 TMEM200BQ69YZ2 307 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 CXXC5Q7LFL8 322 aaKnown RBP6.88□□□□□ -1.31
LINC00535-204ENST00000520513 GIMAP8Q8ND71 665 aaPredicted RBP6.88□□□□□ -1.31
LINC00535-204ENST00000520513 CHMP4CQ96CF2 233 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 FOXRED1Q96CU9 486 aaPredicted RBP6.88□□□□□ -1.31
LINC00535-204ENST00000520513 OR10A5Q9H207 317 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 VPS11Q9H270 941 aa6.88□□□□□ -1.31
LINC00535-204ENST00000520513 G3BP2Q9UN86 482 aaKnown RBP6.88□□□□□ -1.31
LINC00535-204ENST00000520513 GOLGA6L22H0YM25 854 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 GABRDO14764 452 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 AMHP03971 560 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 CR2P20023 1033 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 GDF5P43026 501 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 ERVK-21P61565 698 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 KLF1Q13351 362 aaPredicted RBP6.87□□□□□ -1.31
LINC00535-204ENST00000520513 MOGSQ13724 837 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 NFYCQ13952 458 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 TMEM132BQ14DG7 1078 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 ZMAT1Q5H9K5 638 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 CCDC181Q5TID7 509 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 AGBL4Q5VU57 503 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 FRMD7Q6ZUT3 714 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 RTN4RL1Q86UN2 441 aaPredicted RBP6.87□□□□□ -1.31
LINC00535-204ENST00000520513 E2F7Q96AV8 911 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 PCGF6Q9BYE7 350 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 ZMAT4Q9H898 229 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 FBXO10Q9UK96 956 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 THRAP3Q9Y2W1 955 aaKnown RBP6.87□□□□□ -1.31
LINC00535-204ENST00000520513 EID1Q9Y6B2 187 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 CC2D2AQ9P2K1 1620 aa6.87□□□□□ -1.31
LINC00535-204ENST00000520513 CYR61O00622 381 aa6.86□□□□□ -1.31
LINC00535-204ENST00000520513 ARHGAP6O43182 974 aa6.86□□□□□ -1.31
LINC00535-204ENST00000520513 PARNO95453 639 aaKnown RBP6.86□□□□□ -1.31
LINC00535-204ENST00000520513 STAT5BP51692 787 aa6.86□□□□□ -1.31
LINC00535-204ENST00000520513 KRT85P78386 507 aa6.86□□□□□ -1.31
LINC00535-204ENST00000520513 HGFACQ04756 655 aa6.86□□□□□ -1.31
LINC00535-204ENST00000520513 MCL1Q07820 350 aa6.86□□□□□ -1.31
LINC00535-204ENST00000520513 CAMKK2Q96RR4 588 aa6.86□□□□□ -1.31
LINC00535-204ENST00000520513 PLA2G12BQ9BX93 195 aa6.86□□□□□ -1.31
LINC00535-204ENST00000520513 CHPF2Q9P2E5 772 aa6.86□□□□□ -1.31
LINC00535-204ENST00000520513 NOC2LQ9Y3T9 749 aaKnown RBP6.86□□□□□ -1.31
LINC00535-204ENST00000520513 NR2E1Q9Y466 385 aa6.86□□□□□ -1.31
LINC00535-204ENST00000520513 ASB1Q9Y576 335 aa6.86□□□□□ -1.31
LINC00535-204ENST00000520513 CECR2Q9BXF3 1484 aa6.85□□□□□ -1.31
LINC00535-204ENST00000520513 A0A0G2JNJ9 132 aa6.85□□□□□ -1.31
LINC00535-204ENST00000520513 SHTN1A0MZ66 631 aa6.85□□□□□ -1.31
LINC00535-204ENST00000520513 RAD17O75943 681 aa6.85□□□□□ -1.31
LINC00535-204ENST00000520513 CFBP00751 764 aa6.85□□□□□ -1.31
LINC00535-204ENST00000520513 SLPIP03973 132 aa6.85□□□□□ -1.31
LINC00535-204ENST00000520513 MRE11P49959 708 aa6.85□□□□□ -1.31
LINC00535-204ENST00000520513 INAVAQ3KP66 663 aa6.85□□□□□ -1.31
LINC00535-204ENST00000520513 HSP90AB2PQ58FF8 381 aa6.85□□□□□ -1.31
LINC00535-204ENST00000520513 IGFL4Q6B9Z1 124 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms