RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 BMPR1AP36894 532 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 FGD1P98174 961 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 NR5A1Q13285 461 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 NTRK3Q16288 839 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 LEXMQ3ZCV2 418 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 PPP1R26Q5T8A7 1209 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 BLOC1S2Q6QNY1 142 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 MTHFD1LQ6UB35 978 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 SND1Q7KZF4 910 aaKnown RBP eCLIP10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 CCDC116Q8IYX3 515 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 CRIPAKQ8N1N5 446 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 NME8Q8N427 588 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 FIBCD1Q8N539 461 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 ATP8B4Q8TF62 1192 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 LINC01599Q8WXQ3 324 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 ZNF689Q96CS4 500 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 CELF4Q9BZC1 486 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 KDM3AQ9Y4C1 1321 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 NID2Q14112 1375 aa10.52□□□□□ -0.72
CTNNA1-221ENST00000520339 C5orf67F2Z3F1 127 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 DDX39AO00148 427 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 EDIL3O43854 480 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 DGKIO75912 1065 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 ATP4AP20648 1035 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 KLRC1P26715 233 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 CIITAP33076 1130 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 EVCP57679 992 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 TMEM62Q0P6H9 643 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 COL19A1Q14993 1142 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 TIGD5Q53EQ6 642 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 TCEAL5Q5H9L2 206 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 MCTP2Q6DN12 878 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 CCDC60Q8IWA6 550 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 KIAA0319LQ8IZA0 1049 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 FTHL17Q9BXU8 183 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 C6orf50Q9HD87 102 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 ZNF358Q9NW07 568 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 PADI3Q9ULW8 664 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 IGSF9BQ9UPX0 1349 aa10.52□□□□□ -0.73
CTNNA1-221ENST00000520339 MUC3AQ02505 3323 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 ZBTB42B2RXF5 422 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 IPO5O00410 1097 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 BACH1O14867 736 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 GRM6O15303 877 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 STAU1O95793 577 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 IFNAR1P17181 557 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 KCNA5P22460 613 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 PSMA5P28066 241 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 GNA11P29992 359 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 PDIA3P30101 505 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 CTNNB1P35222 781 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 KRT76Q01546 638 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 OCLNQ16625 522 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 ZNF484Q5JVG2 852 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 FAM160B1Q5W0V3 765 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 ZNF746Q6NUN9 644 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 SWSAP1Q6NVH7 229 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 MIS18BP1Q6P0N0 1132 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 NPAS4Q8IUM7 802 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 REXO1Q8N1G1 1221 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 NEK9Q8TD19 979 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 CCDC12Q8WUD4 166 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 PHKBQ93100 1093 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 UIMC1Q96RL1 719 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 TMX1Q9H3N1 280 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 EPHX3Q9H6B9 360 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 CD320Q9NPF0 282 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 ZNF302Q9NR11 478 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 TBC1D22BQ9NU19 505 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 ADGRA3Q8IWK6 1321 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 BRWD1Q9NSI6 2320 aa10.51□□□□□ -0.73
CTNNA1-221ENST00000520339 MYH6P13533 1939 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 M0QZ92 97 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 M0R2N6 131 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 PPFIA3O75145 1194 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 REC8O95072 547 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 SETQ01105 290 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 AKAP17AQ02040 695 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 FOXC1Q12948 553 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 BTG3Q14201 252 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 PRR16Q569H4 304 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 FAM43BQ6ZT52 329 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 CMTR2Q8IYT2 770 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 RASGRP4Q8TDF6 673 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 LENG9Q96B70 501 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 PABPC5Q96DU9 382 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 ZNF577Q9BSK1 485 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 C11orf84Q9BUA3 381 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 C1QTNF1Q9BXJ1 281 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 RNF26Q9BY78 433 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 LMAN2LQ9H0V9 348 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 NSUN3Q9H649 340 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 ERVK-5Q9HDB9 667 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 RWDD3Q9Y3V2 267 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 COL1A2P08123 1366 aa10.5□□□□□ -0.73
CTNNA1-221ENST00000520339 GBF1Q92538 1859 aa10.49□□□□□ -0.73
CTNNA1-221ENST00000520339 MYH7BA7E2Y1 1941 aa10.49□□□□□ -0.73
CTNNA1-221ENST00000520339 TMEM229AB2RXF0 380 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms