RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 GPR150Q8NGU9 434 aa4.54□□□□□ -1.68
CSMD3-209ENST00000519485 THAP3Q8WTV1 239 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-209ENST00000519485 MKL1Q969V6 931 aa4.54□□□□□ -1.68
CSMD3-209ENST00000519485 EXOC2Q96KP1 924 aa4.54□□□□□ -1.68
CSMD3-209ENST00000519485 GBP4Q96PP9 640 aa4.54□□□□□ -1.68
CSMD3-209ENST00000519485 GPR87Q9BY21 358 aa4.54□□□□□ -1.68
CSMD3-209ENST00000519485 OSBPL2Q9H1P3 480 aa4.54□□□□□ -1.68
CSMD3-209ENST00000519485 PTGFRNQ9P2B2 879 aa4.54□□□□□ -1.68
CSMD3-209ENST00000519485 NDOR1Q9UHB4 597 aa4.54□□□□□ -1.68
CSMD3-209ENST00000519485 MRPS23Q9Y3D9 190 aaKnown RBP4.54□□□□□ -1.68
CSMD3-209ENST00000519485 B3GALT1Q9Y5Z6 326 aa4.54□□□□□ -1.68
CSMD3-209ENST00000519485 SMARCA4P51532 1647 aa4.54□□□□□ -1.68
CSMD3-209ENST00000519485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.53□□□□□ -1.68
CSMD3-209ENST00000519485 GRID2IPA4D2P6 1211 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 GOLGA6L6A8MZA4 724 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 RPS6KA4O75676 772 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 NUDT3O95989 172 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 ITGB1P05556 798 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 C21orf58P58505 322 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 BMS1Q14692 1282 aaKnown RBP4.53□□□□□ -1.68
CSMD3-209ENST00000519485 NFE2L2Q16236 605 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 TM4SF20Q53R12 229 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 ZC3H12BQ5HYM0 836 aaKnown RBP4.53□□□□□ -1.68
CSMD3-209ENST00000519485 MFSD5Q6N075 450 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 SYCE2Q6PIF2 218 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 GAREM2Q75VX8 874 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 ZC3H7AQ8IWR0 971 aaKnown RBP4.53□□□□□ -1.68
CSMD3-209ENST00000519485 ZSWIM2Q8NEG5 633 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 DRC1Q96MC2 740 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 FOXB1Q99853 325 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 TOR3AQ9H497 397 aa4.53□□□□□ -1.68
CSMD3-209ENST00000519485 PRAMEF22A3QJZ6 481 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 C2orf78A6NCI8 922 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 ZAR1LA6NP61 321 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 INO80B-WBP1J3KQ70 363 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 ALDH6A1Q02252 535 aaKnown RBP4.52□□□□□ -1.69
CSMD3-209ENST00000519485 TAP1Q03518 808 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 LY6G5CQ5SRR4 150 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 C1QL3Q5VWW1 255 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 LRRC55Q6ZSA7 311 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 SYNE4Q8N205 404 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 ZNF276Q8N554 614 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 NKD2Q969F2 451 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-209ENST00000519485 MRFAP1L1Q96HT8 127 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 BBC3Q96PG8 261 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-209ENST00000519485 MNTQ99583 582 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 CELF4Q9BZC1 486 aaKnown RBP4.52□□□□□ -1.69
CSMD3-209ENST00000519485 INO80BQ9C086 356 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-209ENST00000519485 RIOX1Q9H6W3 641 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 ZSWIM4Q9H7M6 989 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 SAE1Q9UBE0 346 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-209ENST00000519485 PCDHA9Q9Y5H5 950 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 TONSLQ96HA7 1378 aa4.52□□□□□ -1.69
CSMD3-209ENST00000519485 COL4A3Q01955 1670 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 A0A0A6YYK5 440 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-209ENST00000519485 EFCAB14O75071 495 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 CRTAMO95727 393 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 STAT3P40763 770 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 DNM2P50570 870 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 PTPAQ15257 358 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 DCAF17Q5H9S7 520 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-209ENST00000519485 CATSPEREQ5SY80 951 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 FKBP15Q5T1M5 1219 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 RTN4RL1Q86UN2 441 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-209ENST00000519485 VRK3Q8IV63 474 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 ANKRD53Q8N9V6 530 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 HIPK4Q8NE63 616 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 MDGA1Q8NFP4 955 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 GCDHQ92947 438 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-209ENST00000519485 FOXRED1Q96CU9 486 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-209ENST00000519485 CCDC136Q96JN2 1154 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 MAGEB10Q96LZ2 347 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-209ENST00000519485 TCF25Q9BQ70 676 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 MLST8Q9BVC4 326 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 IL23AQ9NPF7 189 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 SFMBT1Q9UHJ3 866 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 DENND2AQ9ULE3 1009 aa4.51□□□□□ -1.69
CSMD3-209ENST00000519485 ZBED9Q6R2W3 1325 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 SYNJ1O43426 1573 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 CCDC163A0A0D9SF12 145 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 UBE2QL1A1L167 161 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 MASP2O00187 686 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 SCDO00767 359 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 KCNK3O14649 394 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 TCERG1O14776 1098 aaKnown RBP4.5□□□□□ -1.69
CSMD3-209ENST00000519485 B3GALT2O43825 422 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 FAM20BO75063 409 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 IPO13O94829 963 aaKnown RBP4.5□□□□□ -1.69
CSMD3-209ENST00000519485 VSIG10L2P0DP72 767 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 NR4A1P22736 598 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 BPIFB4P59827 614 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 TCIRG1Q13488 830 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 C2orf27AQ580R0 203 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 ZKSCAN2Q63HK3 967 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 FSTL4Q6MZW2 842 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 ADGRG3Q86Y34 549 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 PROKR1Q8TCW9 393 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 UBXN4Q92575 508 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 SLC52A2Q9HAB3 445 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 ZNHIT2Q9UHR6 403 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms