RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 LPLP06858 475 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 ANO4Q32M45 955 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 CPNE8Q86YQ8 564 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 WDR12Q9GZL7 423 aaKnown RBP8.36□□□□□ -1.07
CLK4-202ENST00000519132 RRP7AQ9Y3A4 280 aaKnown RBP8.36□□□□□ -1.07
CLK4-202ENST00000519132 SHANK3Q9BYB0 1731 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 CRB1P82279 1406 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 COL6A2P12110 1019 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 GAS6Q14393 721 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 PCSK7Q16549 785 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 FAM180BQ6P0A1 224 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 ZNF507Q8TCN5 953 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 SLIT2O94813 1529 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 SCN11AQ9UI33 1791 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 OVOS2A0A0G2JMS6 1433 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 C2orf71A6NGG8 1288 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 M0R082 166 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 MPHOSPH10O00566 681 aaKnown RBP8.35□□□□□ -1.07
CLK4-202ENST00000519132 COQ9O75208 318 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 ARL4DP49703 201 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 AMOTQ4VCS5 1084 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 DUSP27Q5VZP5 1158 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 C20orf204Q6ZNR8 217 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 OR2C3Q8N628 320 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 ZNF417Q8TAU3 575 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 SYTL5Q8TDW5 730 aaPredicted RBP8.35□□□□□ -1.07
CLK4-202ENST00000519132 ZNF587Q96SQ5 575 aaPredicted RBP8.35□□□□□ -1.07
CLK4-202ENST00000519132 GGA3Q9NZ52 723 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 SIPA1L3O60292 1781 aaPredicted RBP8.35□□□□□ -1.07
CLK4-202ENST00000519132 CCDC172P0C7W6 258 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 TNFSF4P23510 183 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 MTHFSDQ2M296 383 aaKnown RBP8.35□□□□□ -1.07
CLK4-202ENST00000519132 GPAT2Q6NUI2 795 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 NPFFR2Q9Y5X5 522 aa8.35□□□□□ -1.07
CLK4-202ENST00000519132 NDUFS2O75306 463 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 TERF1P54274 439 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 GPR85P60893 370 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 RASSF7Q02833 373 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 C16orf54Q6UWD8 224 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 PPHLN1Q8NEY8 458 aaKnown RBP8.34□□□□□ -1.07
CLK4-202ENST00000519132 RAB24Q969Q5 203 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 NUP88Q99567 741 aaPredicted RBP8.34□□□□□ -1.07
CLK4-202ENST00000519132 FRRS1LQ9P0K9 344 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 NOC2LQ9Y3T9 749 aaKnown RBP8.34□□□□□ -1.07
CLK4-202ENST00000519132 MEGF6O75095 1541 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 CPP00450 1065 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 ADH5P11766 374 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 NPNTQ6UXI9 565 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 MTERF4Q7Z6M4 381 aaKnown RBP8.34□□□□□ -1.07
CLK4-202ENST00000519132 MIER2Q8N344 545 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 KIAA1958Q8N8K9 716 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 CDIP1Q9H305 208 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 ITM2CQ9NQX7 267 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 LIMCH1Q9UPQ0 1083 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 ACTL7BQ9Y614 415 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 MAP3K5Q99683 1374 aa8.34□□□□□ -1.07
CLK4-202ENST00000519132 ZBED1O96006 694 aa8.34□□□□□ -1.08
CLK4-202ENST00000519132 COL6A1P12109 1028 aa8.34□□□□□ -1.08
CLK4-202ENST00000519132 IRF9Q00978 393 aa8.34□□□□□ -1.08
CLK4-202ENST00000519132 FAM117BQ6P1L5 589 aa8.34□□□□□ -1.08
CLK4-202ENST00000519132 RPAINQ86UA6 219 aa8.34□□□□□ -1.08
CLK4-202ENST00000519132 KIF18BQ86Y91 864 aa8.34□□□□□ -1.08
CLK4-202ENST00000519132 CHAMP1Q96JM3 812 aa8.34□□□□□ -1.08
CLK4-202ENST00000519132 ZMAT4Q9H898 229 aa8.34□□□□□ -1.08
CLK4-202ENST00000519132 STAP2Q9UGK3 403 aa8.34□□□□□ -1.08
CLK4-202ENST00000519132 SYNPO2Q9UMS6 1093 aa8.34□□□□□ -1.08
CLK4-202ENST00000519132 AMY2AP04746 511 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 AMY2BP19961 511 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 ADH6P28332 368 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 ST5P78524 1137 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 ALDH6A1Q02252 535 aaKnown RBP8.33□□□□□ -1.08
CLK4-202ENST00000519132 PUM3Q15397 648 aaKnown RBP8.33□□□□□ -1.08
CLK4-202ENST00000519132 PLEKHO1Q53GL0 409 aaPredicted RBP8.33□□□□□ -1.08
CLK4-202ENST00000519132 KLHDC7AQ5VTJ3 777 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.33□□□□□ -1.08
CLK4-202ENST00000519132 AGGF1Q8N302 714 aaeCLIP8.33□□□□□ -1.08
CLK4-202ENST00000519132 USHBP1Q8N6Y0 703 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 EFHBQ8N7U6 833 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 FOXQ1Q9C009 403 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 ARMT1Q9H993 441 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 CEP131Q9UPN4 1083 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 GRK2P25098 689 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 PPM1AP35813 382 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 EAF2Q96CJ1 260 aaPredicted RBP8.33□□□□□ -1.08
CLK4-202ENST00000519132 C18orf8Q96DM3 657 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 MYCBPQ99417 103 aaPredicted RBP8.33□□□□□ -1.08
CLK4-202ENST00000519132 ALG1Q9BT22 464 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 CERS4Q9HA82 394 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 DMRT3Q9NQL9 472 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 TRMT13Q9NUP7 481 aaKnown RBP8.33□□□□□ -1.08
CLK4-202ENST00000519132 DAGLAQ9Y4D2 1042 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 KDM3BQ7LBC6 1761 aa8.33□□□□□ -1.08
CLK4-202ENST00000519132 GNAT3A8MTJ3 354 aa8.32□□□□□ -1.08
CLK4-202ENST00000519132 PRR33A8MZF0 331 aa8.32□□□□□ -1.08
CLK4-202ENST00000519132 TIMM44O43615 452 aa8.32□□□□□ -1.08
CLK4-202ENST00000519132 LRP6O75581 1613 aa8.32□□□□□ -1.08
CLK4-202ENST00000519132 UBXN7O94888 489 aa8.32□□□□□ -1.08
CLK4-202ENST00000519132 ZNF853P0CG23 659 aa8.32□□□□□ -1.08
CLK4-202ENST00000519132 TAF5Q15542 800 aa8.32□□□□□ -1.08
CLK4-202ENST00000519132 ANGEL2Q5VTE6 544 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms