RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 STK24Q9Y6E0 443 aa27.46■■□□□ 1.99
PVT1-204ENST00000517525 MRPL42Q9Y6G3 142 aaKnown RBP27.46■■□□□ 1.99
PVT1-204ENST00000517525 RALGAPA2Q2PPJ7 1873 aa27.45■■□□□ 1.99
PVT1-204ENST00000517525 HOXA2O43364 376 aa27.45■■□□□ 1.98
PVT1-204ENST00000517525 EOMESO95936 686 aa27.45■■□□□ 1.98
PVT1-204ENST00000517525 CTNNB1P35222 781 aa27.45■■□□□ 1.98
PVT1-204ENST00000517525 PRPHP41219 470 aa27.45■■□□□ 1.98
PVT1-204ENST00000517525 MXD4Q14582 209 aaPredicted RBP27.45■■□□□ 1.98
PVT1-204ENST00000517525 PCBP1Q15365 356 aaKnown RBP eCLIP27.45■■□□□ 1.98
PVT1-204ENST00000517525 ECHDC2Q86YB7 292 aa27.45■■□□□ 1.98
PVT1-204ENST00000517525 KSR1Q8IVT5 923 aa27.45■■□□□ 1.98
PVT1-204ENST00000517525 NACC1Q96RE7 527 aa27.45■■□□□ 1.98
PVT1-204ENST00000517525 PRDM6Q9NQX0 595 aa27.45■■□□□ 1.98
PVT1-204ENST00000517525 PCDHB6Q9Y5E3 794 aa27.45■■□□□ 1.98
PVT1-204ENST00000517525 COL4A4P53420 1690 aaPredicted RBP27.45■■□□□ 1.98
PVT1-204ENST00000517525 MED24O75448 989 aa27.44■■□□□ 1.98
PVT1-204ENST00000517525 PTGDRQ13258 359 aa27.44■■□□□ 1.98
PVT1-204ENST00000517525 ZNF598Q86UK7 904 aaKnown RBP27.44■■□□□ 1.98
PVT1-204ENST00000517525 IFNLR1Q8IU57 520 aaPredicted RBP27.44■■□□□ 1.98
PVT1-204ENST00000517525 MICALL1Q8N3F8 863 aa27.44■■□□□ 1.98
PVT1-204ENST00000517525 IGSF22Q8N9C0 903 aa27.44■■□□□ 1.98
PVT1-204ENST00000517525 RSPH1Q8WYR4 309 aa27.44■■□□□ 1.98
PVT1-204ENST00000517525 NLRP4Q96MN2 994 aa27.44■■□□□ 1.98
PVT1-204ENST00000517525 COG5Q9UP83 839 aa27.44■■□□□ 1.98
PVT1-204ENST00000517525 EYSQ5T1H1 3165 aa27.43■■□□□ 1.98
PVT1-204ENST00000517525 H3BQV1 296 aa27.43■■□□□ 1.98
PVT1-204ENST00000517525 CSDE1O75534 798 aaKnown RBP27.43■■□□□ 1.98
PVT1-204ENST00000517525 ARL2P36404 184 aa27.43■■□□□ 1.98
PVT1-204ENST00000517525 NBR1Q14596 966 aa27.43■■□□□ 1.98
PVT1-204ENST00000517525 FAM102BQ5T8I3 360 aa27.43■■□□□ 1.98
PVT1-204ENST00000517525 HAUS3Q68CZ6 603 aa27.43■■□□□ 1.98
PVT1-204ENST00000517525 PIGOQ8TEQ8 1089 aa27.43■■□□□ 1.98
PVT1-204ENST00000517525 TMEM117Q9H0C3 514 aa27.43■■□□□ 1.98
PVT1-204ENST00000517525 RNF19AQ9NV58 838 aa27.43■■□□□ 1.98
PVT1-204ENST00000517525 PRUNE2Q8WUY3 3088 aa27.42■■□□□ 1.98
PVT1-204ENST00000517525 FGFR4P22455 802 aa27.42■■□□□ 1.98
PVT1-204ENST00000517525 GATMP50440 423 aa27.42■■□□□ 1.98
PVT1-204ENST00000517525 LARP1BQ659C4 914 aaKnown RBP27.42■■□□□ 1.98
PVT1-204ENST00000517525 MCTP1Q6DN14 999 aa27.42■■□□□ 1.98
PVT1-204ENST00000517525 NFKBIZQ9BYH8 718 aa27.42■■□□□ 1.98
PVT1-204ENST00000517525 RAB34Q9BZG1 259 aa27.42■■□□□ 1.98
PVT1-204ENST00000517525 ZNF623O75123 536 aa27.41■■□□□ 1.98
PVT1-204ENST00000517525 SKIP12755 728 aa27.41■■□□□ 1.98
PVT1-204ENST00000517525 PTENP60484 403 aa27.41■■□□□ 1.98
PVT1-204ENST00000517525 MRPS5P82675 430 aaKnown RBP27.41■■□□□ 1.98
PVT1-204ENST00000517525 TIGD5Q53EQ6 642 aa27.41■■□□□ 1.98
PVT1-204ENST00000517525 CATSPER4Q7RTX7 472 aa27.41■■□□□ 1.98
PVT1-204ENST00000517525 AGPAT5Q9NUQ2 364 aa27.41■■□□□ 1.98
PVT1-204ENST00000517525 SRGAP2CP0DJJ0 459 aa27.4■■□□□ 1.98
PVT1-204ENST00000517525 PAN2Q504Q3 1202 aaKnown RBP27.4■■□□□ 1.98
PVT1-204ENST00000517525 TJAP1Q5JTD0 557 aa27.4■■□□□ 1.98
PVT1-204ENST00000517525 RNF149Q8NC42 400 aa27.4■■□□□ 1.98
PVT1-204ENST00000517525 CCDC43Q96MW1 224 aaKnown RBP27.4■■□□□ 1.98
PVT1-204ENST00000517525 CASD1Q96PB1 797 aa27.4■■□□□ 1.98
PVT1-204ENST00000517525 ASB2Q96Q27 587 aa27.4■■□□□ 1.98
PVT1-204ENST00000517525 LRWD1Q9UFC0 647 aa27.4■■□□□ 1.98
PVT1-204ENST00000517525 PLAGL2Q9UPG8 496 aa27.4■■□□□ 1.98
PVT1-204ENST00000517525 CUL9Q8IWT3 2517 aa27.4■■□□□ 1.98
PVT1-204ENST00000517525 NLRC5Q86WI3 1866 aa27.39■■□□□ 1.98
PVT1-204ENST00000517525 TBKBP1A7MCY6 615 aa27.39■■□□□ 1.98
PVT1-204ENST00000517525 FGFR1P11362 822 aa27.39■■□□□ 1.98
PVT1-204ENST00000517525 ATF7P17544 494 aaPredicted RBP27.39■■□□□ 1.98
PVT1-204ENST00000517525 PHKA2P46019 1235 aa27.39■■□□□ 1.98
PVT1-204ENST00000517525 RAB27AP51159 221 aa27.39■■□□□ 1.98
PVT1-204ENST00000517525 TFDP1Q14186 410 aa27.39■■□□□ 1.98
PVT1-204ENST00000517525 MCPH1Q8NEM0 835 aa27.39■■□□□ 1.98
PVT1-204ENST00000517525 SYMPKQ92797 1274 aaKnown RBP27.39■■□□□ 1.98
PVT1-204ENST00000517525 INTS4Q96HW7 963 aaKnown RBP27.39■■□□□ 1.98
PVT1-204ENST00000517525 MINDY3Q9H8M7 445 aa27.39■■□□□ 1.98
PVT1-204ENST00000517525 AAASQ9NRG9 546 aa27.39■■□□□ 1.98
PVT1-204ENST00000517525 UNC80Q8N2C7 3258 aa27.38■■□□□ 1.97
PVT1-204ENST00000517525 GRM6O15303 877 aa27.38■■□□□ 1.97
PVT1-204ENST00000517525 ATP2C1P98194 919 aaPredicted RBP27.38■■□□□ 1.97
PVT1-204ENST00000517525 COL19A1Q14993 1142 aa27.38■■□□□ 1.97
PVT1-204ENST00000517525 CSPP1Q1MSJ5 1256 aa27.38■■□□□ 1.97
PVT1-204ENST00000517525 AAK1Q2M2I8 961 aa27.38■■□□□ 1.97
PVT1-204ENST00000517525 POTEGQ6S5H5 508 aa27.38■■□□□ 1.97
PVT1-204ENST00000517525 BMP2KQ9NSY1 1161 aaPredicted RBP27.38■■□□□ 1.97
PVT1-204ENST00000517525 PIN4Q9Y237 131 aaKnown RBP27.38■■□□□ 1.97
PVT1-204ENST00000517525 ARID2Q68CP9 1835 aa27.38■■□□□ 1.97
PVT1-204ENST00000517525 PDCP20941 246 aa27.37■■□□□ 1.97
PVT1-204ENST00000517525 GLRA2P23416 452 aa27.37■■□□□ 1.97
PVT1-204ENST00000517525 HOXA11P31270 313 aaPredicted RBP27.37■■□□□ 1.97
PVT1-204ENST00000517525 IL17AQ16552 155 aa27.37■■□□□ 1.97
PVT1-204ENST00000517525 ARL6IP4Q66PJ3 421 aaKnown RBP27.37■■□□□ 1.97
PVT1-204ENST00000517525 TWF2Q6IBS0 349 aaKnown RBP27.37■■□□□ 1.97
PVT1-204ENST00000517525 DTHD1Q6ZMT9 781 aa27.37■■□□□ 1.97
PVT1-204ENST00000517525 SPPL3Q8TCT6 385 aa27.37■■□□□ 1.97
PVT1-204ENST00000517525 ASAP3Q8TDY4 903 aa27.37■■□□□ 1.97
PVT1-204ENST00000517525 HLA-CQ95604 372 aa27.37■■□□□ 1.97
PVT1-204ENST00000517525 CWH43Q9H720 699 aa27.37■■□□□ 1.97
PVT1-204ENST00000517525 TYW1Q9NV66 732 aaKnown RBP27.37■■□□□ 1.97
PVT1-204ENST00000517525 GTF3C3Q9Y5Q9 886 aa27.37■■□□□ 1.97
PVT1-204ENST00000517525 FNDC1Q4ZHG4 1894 aaPredicted RBP27.36■■□□□ 1.97
PVT1-204ENST00000517525 A0A087WWV3 80 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.36■■□□□ 1.97
PVT1-204ENST00000517525 ITGB1P05556 798 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 CYP11B2P19099 503 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 AXLP30530 894 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 CCT6AP40227 531 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms