RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 SPATA1Q5VX52 437 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 CSGALNACT2Q8N6G5 542 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 DHTKD1Q96HY7 919 aaPredicted RBP17.09■□□□□ 0.33
TRPS1-206ENST00000517323 SUCLA2Q9P2R7 463 aaPredicted RBP17.09■□□□□ 0.33
TRPS1-206ENST00000517323 GINS2Q9Y248 185 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 Q9Y3F1 56 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 IGKV6-21A0A0C4DH24 114 aa17.08■□□□□ 0.33
TRPS1-206ENST00000517323 TULP1O00294 542 aaPredicted RBP17.08■□□□□ 0.33
TRPS1-206ENST00000517323 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.33
TRPS1-206ENST00000517323 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.33
TRPS1-206ENST00000517323 RFC5P40937 340 aa17.08■□□□□ 0.33
TRPS1-206ENST00000517323 LAMTOR4Q0VGL1 99 aa17.08■□□□□ 0.33
TRPS1-206ENST00000517323 NBPF20Q3BBV1 942 aa17.08■□□□□ 0.33
TRPS1-206ENST00000517323 STRA6Q9BX79 667 aa17.08■□□□□ 0.33
TRPS1-206ENST00000517323 UPF3AQ9H1J1 476 aaKnown RBP17.08■□□□□ 0.33
TRPS1-206ENST00000517323 HAS3O00219 553 aa17.08■□□□□ 0.32
TRPS1-206ENST00000517323 CAVIN2O95810 425 aa17.08■□□□□ 0.32
TRPS1-206ENST00000517323 NCKAP1LP55160 1127 aa17.08■□□□□ 0.32
TRPS1-206ENST00000517323 KNOP1Q1ED39 458 aaKnown RBP17.08■□□□□ 0.32
TRPS1-206ENST00000517323 ZCWPW2Q504Y3 356 aa17.08■□□□□ 0.32
TRPS1-206ENST00000517323 FAM47CQ5HY64 1035 aa17.08■□□□□ 0.32
TRPS1-206ENST00000517323 CCSAPQ6IQ19 270 aaPredicted RBP17.08■□□□□ 0.32
TRPS1-206ENST00000517323 RNF149Q8NC42 400 aa17.08■□□□□ 0.32
TRPS1-206ENST00000517323 ZNF507Q8TCN5 953 aa17.08■□□□□ 0.32
TRPS1-206ENST00000517323 MINDY3Q9H8M7 445 aa17.08■□□□□ 0.32
TRPS1-206ENST00000517323 PCDH10Q9P2E7 1040 aa17.08■□□□□ 0.32
TRPS1-206ENST00000517323 AKT3Q9Y243 479 aa17.08■□□□□ 0.32
TRPS1-206ENST00000517323 GRIN2DO15399 1336 aa17.07■□□□□ 0.32
TRPS1-206ENST00000517323 KIAA0100Q14667 2235 aaKnown RBP17.07■□□□□ 0.32
TRPS1-206ENST00000517323 ADCY5O95622 1261 aa17.07■□□□□ 0.32
TRPS1-206ENST00000517323 ZNF18P17022 549 aa17.07■□□□□ 0.32
TRPS1-206ENST00000517323 BRDTQ58F21 947 aaPredicted RBP17.07■□□□□ 0.32
TRPS1-206ENST00000517323 NFRKBQ6P4R8 1299 aa17.07■□□□□ 0.32
TRPS1-206ENST00000517323 KLHDC9Q8NEP7 349 aa17.07■□□□□ 0.32
TRPS1-206ENST00000517323 NOC3LQ8WTT2 800 aaKnown RBP17.07■□□□□ 0.32
TRPS1-206ENST00000517323 NAP1L5Q96NT1 182 aaPredicted RBP17.07■□□□□ 0.32
TRPS1-206ENST00000517323 DEFB118Q96PH6 123 aa17.07■□□□□ 0.32
TRPS1-206ENST00000517323 PCIF1Q9H4Z3 704 aa17.07■□□□□ 0.32
TRPS1-206ENST00000517323 IFNKQ9P0W0 207 aa17.07■□□□□ 0.32
TRPS1-206ENST00000517323 SMTNL1A8MU46 457 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 ANKRD63C9JTQ0 380 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 IQCF3P0C7M6 154 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 ARHGEF6Q15052 776 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 ZNF484Q5JVG2 852 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 CDR2LQ86X02 465 aaPredicted RBP17.06■□□□□ 0.32
TRPS1-206ENST00000517323 WNT8BQ93098 351 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 VTI1AQ96AJ9 217 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRPS1-206ENST00000517323 CDHR5Q9HBB8 845 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 SPC25Q9HBM1 224 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 SEL1LQ9UBV2 794 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 MAPTP10636 758 aaKnown RBP17.06■□□□□ 0.32
TRPS1-206ENST00000517323 FGFR4P22455 802 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 CASP4P49662 377 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 COBLL1Q53SF7 1204 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 CDKAL1Q5VV42 579 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 LRRC55Q6ZSA7 311 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 SYCP3Q8IZU3 236 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 C7orf31Q8N865 590 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 IFT74Q96LB3 600 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 TRIM5Q9C035 493 aa17.06■□□□□ 0.32
TRPS1-206ENST00000517323 CDK11BP21127 795 aaKnown RBP17.05■□□□□ 0.32
TRPS1-206ENST00000517323 CYP2J2P51589 502 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 KIZQ2M2Z5 673 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 GDF6Q6KF10 455 aaPredicted RBP17.05■□□□□ 0.32
TRPS1-206ENST00000517323 SLC39A4Q6P5W5 647 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 KIAA0319LQ8IZA0 1049 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 LINC01465Q8N7H1 131 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 DNAJB3Q8WWF6 145 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 PSPC1Q8WXF1 523 aaKnown RBP17.05■□□□□ 0.32
TRPS1-206ENST00000517323 CBWD1Q9BRT8 395 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 RNF208Q9H0X6 261 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 TAB2Q9NYJ8 693 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 TBX20Q9UMR3 447 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 A0A087WZ62 844 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 SMTNP53814 917 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 GTF2BQ00403 316 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 FANCCQ00597 558 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 BMT2Q1RMZ1 405 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 APTXQ7Z2E3 356 aaKnown RBP17.05■□□□□ 0.32
TRPS1-206ENST00000517323 RDH13Q8NBN7 331 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 DEPTORQ8TB45 409 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 FDXACB1Q9BRP7 624 aaPredicted RBP17.05■□□□□ 0.32
TRPS1-206ENST00000517323 MTG1Q9BT17 334 aaPredicted RBP17.05■□□□□ 0.32
TRPS1-206ENST00000517323 TIPINQ9BVW5 301 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 XPO4Q9C0E2 1151 aaKnown RBP17.05■□□□□ 0.32
TRPS1-206ENST00000517323 INTS13Q9NVM9 706 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 ARHGAP28Q9P2N2 729 aa17.05■□□□□ 0.32
TRPS1-206ENST00000517323 KCNJ18B7U540 433 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 B4GALT5O43286 388 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 CCL5P13501 91 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 SIP14410 1827 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 NR2F2P24468 414 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 ACLYP53396 1101 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 KCNJ12Q14500 433 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 IER5Q5VY09 327 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 ZBTB45Q96K62 511 aaPredicted RBP17.04■□□□□ 0.32
TRPS1-206ENST00000517323 VPS16Q9H269 839 aa17.04■□□□□ 0.32
TRPS1-206ENST00000517323 PCDHB13Q9Y5F0 798 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms