RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 AFPP02771 609 aaKnown RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 CCDC175P0C221 793 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 XRCC5P13010 732 aaKnown RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 PON1P27169 355 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 CNGA1P29973 690 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 ADSSP30520 456 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 MAPK4P31152 587 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 ABCD1P33897 745 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 TCF7P36402 384 aaPredicted RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 RFC5P40937 340 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 SOX10P56693 466 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 HUNKP57058 714 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 ETF1P62495 437 aaKnown RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 ARHGAP1Q07960 439 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 TTLL4Q14679 1199 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 EMC2Q15006 297 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 PPP2R5AQ15172 486 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 ASTE1Q2TB18 679 aaPredicted RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 HSDL1Q3SXM5 330 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 MTERF2Q49AM1 385 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 BRDTQ58F21 947 aaPredicted RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 MORN1Q5T089 497 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 WDR78Q5VTH9 848 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 KLHDC7AQ5VTJ3 777 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 FAM160B1Q5W0V3 765 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 PDXDC1Q6P996 788 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 ZNF662Q6ZS27 426 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 TAS1R3Q7RTX0 852 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 TRMT1LQ7Z2T5 733 aaKnown RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 GPR142Q7Z601 462 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 SAPCD2Q86UD0 394 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 RASAL3Q86YV0 1011 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 MAP4K3Q8IVH8 894 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 FBXO16Q8IX29 292 aaPredicted RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 CCDC170Q8IYT3 715 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 SYCP3Q8IZU3 236 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 NEK11Q8NG66 645 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 SCFD2Q8WU76 684 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 BBXQ8WY36 941 aaPredicted RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 EMID1Q96A84 441 aaPredicted RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 FAM167AQ96KS9 214 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 FBXL18Q96ME1 805 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 NUCKS1Q9H1E3 243 aaKnown RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 GANQ9H2C0 597 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 MMRN2Q9H8L6 949 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 VTA1Q9NP79 307 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 KMT5AQ9NQR1 393 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 PDGFCQ9NRA1 345 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 FAM207AQ9NSI2 230 aaPredicted RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 AIPL1Q9NZN9 384 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 CEP72Q9P209 647 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 FBXL5Q9UKA1 691 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 MYO6Q9UM54 1294 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 EXOC7Q9UPT5 735 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 USP20Q9Y2K6 914 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 FRMD4BQ9Y2L6 1034 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 REXO2Q9Y3B8 237 aaKnown RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 R3HCC1Q9Y3T6 440 aaKnown RBP5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 EMSYQ7Z589 1322 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 ADGRA3Q8IWK6 1321 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 PASKQ96RG2 1323 aa5.94□□□□□ -1.46
SCARNA20.4-201ENST00000516969 TRIP11Q15643 1979 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 A0A0U1RQJ8 604 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 SSU72P8A0A1W2PR75 194 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 DENND3A2RUS2 1198 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 SLC15A5A6NIM6 579 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 EIF3CLB5ME19 914 aaKnown RBP5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 TISP43B9A030 160 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 ANKRD63C9JTQ0 380 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 H0YCG3 227 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 IGF2BP3O00425 579 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 FANCGO15287 622 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 EXOC3O60645 756 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 NDUFA10O95299 355 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 LCA5LO95447 670 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 PIGRP01833 764 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 IGHA2P01877 340 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 TXNP10599 105 aaKnown RBP5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 HOXD8P13378 290 aaPredicted RBP5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 SLC9A1P19634 815 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 GLRA2P23416 452 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 GTF2F1P35269 517 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 ARHGAP25P42331 645 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 NAMPTP43490 491 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 FMO5P49326 533 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 SLC26A2P50443 739 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 CYP2J2P51589 502 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 ZNF157P51786 506 aaPredicted RBP5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 POLGP54098 1239 aaPredicted RBP5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 INHBEP58166 350 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 POLR2FP61218 127 aaKnown RBP5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 ENPEPQ07075 957 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 BFSP1Q12934 665 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 MAPK8IP2Q13387 824 aaPredicted RBP5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 MKRN4PQ13434 485 aaPredicted RBP5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 IRF5Q13568 498 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 LAMC2Q13753 1193 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 PLCB4Q15147 1175 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 EXOC3L4Q17RC7 722 aa5.93□□□□□ -1.46
SCARNA20.4-201ENST00000516969 C1orf220Q5T0J3 134 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms