RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 TRPM5Q9NZQ8 1165 aa1.57□□□□□ -2.16
SCARNA23-201ENST00000516060 ARPP21Q9UBL0 812 aaPredicted RBP1.57□□□□□ -2.16
SCARNA23-201ENST00000516060 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.57□□□□□ -2.16
SCARNA23-201ENST00000516060 RBM8AQ9Y5S9 174 aaKnown RBP1.57□□□□□ -2.16
SCARNA23-201ENST00000516060 NOTCH3Q9UM47 2321 aa1.57□□□□□ -2.16
SCARNA23-201ENST00000516060 NOTCH4Q99466 2003 aa1.57□□□□□ -2.16
SCARNA23-201ENST00000516060 NOTCH2Q04721 2471 aa1.57□□□□□ -2.16
SCARNA23-201ENST00000516060 TCRBV5S4A2TA0A5A2 114 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 UNC119BA6NIH7 251 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 H2AFYO75367 372 aaKnown RBP1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 MOSPD3O75425 235 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 STC2O76061 302 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 GRK2P25098 689 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 MT3P25713 68 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 APOBEC3AP31941 199 aaPredicted RBP1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 GRK3P35626 688 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 SESN2P58004 480 aaPredicted RBP1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 KLF9Q13886 244 aaPredicted RBP1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 ZNF628Q5EBL2 1059 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 VHLLQ6RSH7 139 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 CCDC81Q6ZN84 652 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 HS2ST1Q7LGA3 356 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 PTF1AQ7RTS3 328 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 GDF7Q7Z4P5 450 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 APBB1IPQ7Z5R6 666 aaPredicted RBP1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 CPEB3Q8NE35 698 aaKnown RBP1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 WDR48Q8TAF3 677 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 GCDHQ92947 438 aaPredicted RBP1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 ARL8AQ96BM9 186 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 ADAM2Q99965 735 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 NDC1Q9BTX1 674 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 HAPLN2Q9GZV7 340 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 C1orf115Q9H7X2 142 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 MRS2Q9HD23 443 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 RIC8BQ9NVN3 520 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 FOXJ2Q9P0K8 574 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 RCAN3Q9UKA8 241 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 CHST2Q9Y4C5 530 aa1.56□□□□□ -2.16
SCARNA23-201ENST00000516060 IGKV2D-30A0A075B6S6 120 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 WNT9AO14904 365 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 NAT2P11245 290 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 ITPKBP27987 946 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 POLGP54098 1239 aaPredicted RBP1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 PDE4CQ08493 712 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 ETFDHQ16134 617 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 METTL24Q5JXM2 366 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 ZNF626Q68DY1 528 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 KIAA1161Q6NSJ0 714 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 MEPCEQ7L2J0 689 aaKnown RBP1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 ZNF227Q86WZ6 799 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 RBMXL3Q8N7X1 1067 aaKnown RBP1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 GFM2Q969S9 779 aaKnown RBP1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 CRBNQ96SW2 442 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 HIRIP3Q9BW71 556 aaPredicted RBP1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 UCKL1Q9NWZ5 548 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 SLC17A6Q9P2U8 582 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 CACNA1IQ9P0X4 2223 aa1.55□□□□□ -2.16
SCARNA23-201ENST00000516060 MANSC4A6NHS7 340 aaPredicted RBP1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 MAFO75444 373 aaPredicted RBP1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 GAS8-AS1O95177 125 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 SPDEFO95238 335 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 BRD1O95696 1058 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 C4BPAP04003 597 aaKnown RBP1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 CAPNS1P04632 268 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 VSIG10L2P0DP72 767 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 PRKCSHP14314 528 aaPredicted RBP1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 DDX6P26196 483 aaKnown RBP eCLIP1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 GIPRP48546 466 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 HERVK_113P62684 666 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 TUBA4AP68366 448 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 SPIDRQ14159 915 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 VPS72Q15906 364 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 DGKKQ5KSL6 1271 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 PIK3R6Q5UE93 754 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 LBX2Q6XYB7 198 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 NLGN4XQ8N0W4 816 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 OR52N2Q8NGI0 321 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 RPL36ALQ969Q0 106 aaKnown RBP1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 PDLIM2Q96JY6 352 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 DCLRE1CQ96SD1 692 aaKnown RBP1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 TEX101Q9BY14 249 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 CPEB1Q9BZB8 566 aaKnown RBP1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 ASB6Q9NWX5 421 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 SRPK3Q9UPE1 567 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 BTBD3Q9Y2F9 522 aa1.54□□□□□ -2.16
SCARNA23-201ENST00000516060 LEFTY2O00292 366 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 CLASP2O75122 1294 aaKnown RBP1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 TOX4O94842 621 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 PRR35P0CG20 571 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 ITGAMP11215 1152 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 ZNF134P52741 427 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 EIF6P56537 245 aaKnown RBP1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 SCAPQ12770 1279 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 KIZQ2M2Z5 673 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 FAM214AQ32MH5 1076 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 KRT71Q3SY84 523 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 RSPO2Q6UXX9 243 aaPredicted RBP1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 PLXDC1Q8IUK5 500 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 CMTM4Q8IZR5 234 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms