RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 SAFB2Q14151 953 aaKnown RBP eCLIP4.67□□□□□ -1.66
HERC4-215ENST00000515753 GRAMD4Q6IC98 578 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 MRGPRGQ86SM5 289 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 ADGRE4PQ86SQ3 457 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 NME9Q86XW9 330 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 TMPRSS6Q8IU80 811 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 THEMISQ8N1K5 641 aaPredicted RBP4.67□□□□□ -1.66
HERC4-215ENST00000515753 EFHBQ8N7U6 833 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 C16orf92Q96LL3 132 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 GBP4Q96PP9 640 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 TARS2Q9BW92 718 aaKnown RBP4.67□□□□□ -1.66
HERC4-215ENST00000515753 MTFR1LQ9H019 292 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 MSL2Q9HCI7 577 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 SH3BP1Q9Y3L3 701 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 SPO11Q9Y5K1 396 aa4.67□□□□□ -1.66
HERC4-215ENST00000515753 A0A087X0B3 334 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 RPS6KA4O75676 772 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 PRLP01236 227 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 KRT4P19013 534 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 KIF11P52732 1056 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 RIN1Q13671 783 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 ZNF174Q15697 407 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 GPR158Q5T848 1215 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 KIAA1958Q8N8K9 716 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 HIPK4Q8NE63 616 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 CALML6Q8TD86 181 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 CRAMP1Q96RY5 1269 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 TTPALQ9BTX7 342 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 PCIF1Q9H4Z3 704 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 PARPBPQ9NWS1 579 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 AURKAIP1Q9NWT8 199 aaPredicted RBP4.66□□□□□ -1.66
HERC4-215ENST00000515753 MAGEL2Q9UJ55 1249 aa4.66□□□□□ -1.66
HERC4-215ENST00000515753 PCSK5Q92824 1860 aa4.65□□□□□ -1.66
HERC4-215ENST00000515753 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 KPNA6O60684 536 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 GAS7O60861 476 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 RAMP2O60895 175 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 ATP2A2P16615 1042 aaKnown RBP4.65□□□□□ -1.67
HERC4-215ENST00000515753 SCNN1GP51170 649 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 PHC1P78364 1004 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 ATP2C1P98194 919 aaPredicted RBP4.65□□□□□ -1.67
HERC4-215ENST00000515753 SLC25A3Q00325 362 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 ADCY1Q08828 1119 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 FSTL1Q12841 308 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 TMEM132BQ14DG7 1078 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 SEPT7Q16181 437 aaKnown RBP4.65□□□□□ -1.67
HERC4-215ENST00000515753 PCSK4Q6UW60 755 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 Q6ZPA2 131 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 Q6ZRM9 215 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 DHX37Q8IY37 1157 aaKnown RBP4.65□□□□□ -1.67
HERC4-215ENST00000515753 ZZZ3Q8IYH5 903 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 SMC1BQ8NDV3 1235 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 ERCC4Q92889 916 aaPredicted RBP4.65□□□□□ -1.67
HERC4-215ENST00000515753 OXSMQ9NWU1 459 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 ZKSCAN5Q9Y2L8 839 aa4.65□□□□□ -1.67
HERC4-215ENST00000515753 A0A1W2PRX2 142 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 CYP27B1O15528 508 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 PPFIA2O75334 1257 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 APEX1P27695 318 aaKnown RBP4.64□□□□□ -1.67
HERC4-215ENST00000515753 LSSP48449 732 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 GYS2P54840 703 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 OCRLQ01968 901 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 ROM1Q03395 351 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 LRRC32Q14392 662 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 DHCR24Q15392 516 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 ESRP1Q6NXG1 681 aaKnown RBP4.64□□□□□ -1.67
HERC4-215ENST00000515753 RNF180Q86T96 592 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 THNSL2Q86YJ6 484 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 BCL6BQ8N143 479 aaPredicted RBP4.64□□□□□ -1.67
HERC4-215ENST00000515753 MAML3Q96JK9 1138 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 RPL10LQ96L21 214 aaKnown RBP4.64□□□□□ -1.67
HERC4-215ENST00000515753 HAPLN2Q9GZV7 340 aa4.64□□□□□ -1.67
HERC4-215ENST00000515753 USP36Q9P275 1121 aaKnown RBP4.64□□□□□ -1.67
HERC4-215ENST00000515753 UBA6A0AVT1 1052 aaPredicted RBP4.63□□□□□ -1.67
HERC4-215ENST00000515753 ZNF891A8MT65 544 aaPredicted RBP4.63□□□□□ -1.67
HERC4-215ENST00000515753 PDE8AO60658 829 aa4.63□□□□□ -1.67
HERC4-215ENST00000515753 KRT37O76014 449 aa4.63□□□□□ -1.67
HERC4-215ENST00000515753 VIL1P09327 827 aaKnown RBP4.63□□□□□ -1.67
HERC4-215ENST00000515753 NEK4P51957 841 aa4.63□□□□□ -1.67
HERC4-215ENST00000515753 MAP3K12Q12852 859 aa4.63□□□□□ -1.67
HERC4-215ENST00000515753 PCBP1Q15365 356 aaKnown RBP eCLIP4.63□□□□□ -1.67
HERC4-215ENST00000515753 C21orf62-AS1Q17RA5 79 aa4.63□□□□□ -1.67
HERC4-215ENST00000515753 CNNM4Q6P4Q7 775 aa4.63□□□□□ -1.67
HERC4-215ENST00000515753 ULK2Q8IYT8 1036 aa4.63□□□□□ -1.67
HERC4-215ENST00000515753 RPUSD2Q8IZ73 545 aaKnown RBP4.63□□□□□ -1.67
HERC4-215ENST00000515753 OR2W6PQ8NHA6 318 aa4.63□□□□□ -1.67
HERC4-215ENST00000515753 ELF4Q99607 663 aaPredicted RBP4.63□□□□□ -1.67
HERC4-215ENST00000515753 SLKQ9H2G2 1235 aaPredicted RBP4.63□□□□□ -1.67
HERC4-215ENST00000515753 ZMAT4Q9H898 229 aa4.63□□□□□ -1.67
HERC4-215ENST00000515753 GPRC5BQ9NZH0 403 aa4.63□□□□□ -1.67
HERC4-215ENST00000515753 VWA7Q9Y334 891 aa4.63□□□□□ -1.67
HERC4-215ENST00000515753 CTDP1Q9Y5B0 961 aaPredicted RBP4.63□□□□□ -1.67
HERC4-215ENST00000515753 PMS2P1A4D2B8 440 aa4.62□□□□□ -1.67
HERC4-215ENST00000515753 FAM20BO75063 409 aa4.62□□□□□ -1.67
HERC4-215ENST00000515753 HSP90B1P14625 803 aaKnown RBP4.62□□□□□ -1.67
HERC4-215ENST00000515753 BPIP17213 487 aa4.62□□□□□ -1.67
HERC4-215ENST00000515753 CD40P25942 277 aa4.62□□□□□ -1.67
HERC4-215ENST00000515753 PTX3P26022 381 aaPredicted RBP4.62□□□□□ -1.67
HERC4-215ENST00000515753 SMAD3P84022 425 aaKnown RBP4.62□□□□□ -1.67
HERC4-215ENST00000515753 CNGB1Q14028 1251 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms