RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 DHX37Q8IY37 1157 aaKnown RBP13.11□□□□□ -0.31
LMNA-224ENST00000515711 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
LMNA-224ENST00000515711 CCAR2Q8N163 923 aaKnown RBP13.11□□□□□ -0.31
LMNA-224ENST00000515711 IFT74Q96LB3 600 aa13.11□□□□□ -0.31
LMNA-224ENST00000515711 PCMTD1Q96MG8 357 aaPredicted RBP13.11□□□□□ -0.31
LMNA-224ENST00000515711 FRMD4BQ9Y2L6 1034 aa13.11□□□□□ -0.31
LMNA-224ENST00000515711 LUC7L2Q9Y383 392 aaKnown RBP13.11□□□□□ -0.31
LMNA-224ENST00000515711 GSTTP1A0A1W2PQM5 241 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 FKTNO75072 461 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 KRT9P35527 623 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 TCF7P36402 384 aaPredicted RBP13.1□□□□□ -0.31
LMNA-224ENST00000515711 STAT5BP51692 787 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 PEX3P56589 373 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 ZBED6P86452 979 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 SREBF2Q12772 1141 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 EMC2Q15006 297 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 MTERF2Q49AM1 385 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 ZC2HC1CQ53FD0 456 aaPredicted RBP13.1□□□□□ -0.31
LMNA-224ENST00000515711 DNTTIP2Q5QJE6 756 aaKnown RBP13.1□□□□□ -0.31
LMNA-224ENST00000515711 CCDC62Q6P9F0 684 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 CYP26C1Q6V0L0 522 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 EEPD1Q7L9B9 569 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 PLPPR4Q7Z2D5 763 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 HAUS6Q7Z4H7 955 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 SLC7A3Q8WY07 619 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 BBXQ8WY36 941 aaPredicted RBP13.1□□□□□ -0.31
LMNA-224ENST00000515711 EEF2KMTQ96G04 330 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 DNAJC7Q99615 494 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 GPR20Q99678 358 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 PTPN18Q99952 460 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 JPH2Q9BR39 696 aaPredicted RBP13.1□□□□□ -0.31
LMNA-224ENST00000515711 TTYH3Q9C0H2 523 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 PDLIM7Q9NR12 457 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 AGPAT3Q9NRZ7 376 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 ZNHIT6Q9NWK9 470 aaKnown RBP13.1□□□□□ -0.31
LMNA-224ENST00000515711 SIK3Q9Y2K2 1263 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 PHLPP2Q6ZVD8 1323 aa13.1□□□□□ -0.31
LMNA-224ENST00000515711 RBM47A0AV96 593 aaKnown RBP13.09□□□□□ -0.31
LMNA-224ENST00000515711 TMEM150BA6NC51 233 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 NKRFO15226 690 aaKnown RBP eCLIP13.09□□□□□ -0.31
LMNA-224ENST00000515711 MAPK13O15264 365 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 AFPP02771 609 aaKnown RBP13.09□□□□□ -0.31
LMNA-224ENST00000515711 TXNP10599 105 aaKnown RBP13.09□□□□□ -0.31
LMNA-224ENST00000515711 CENPFP49454 3210 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
LMNA-224ENST00000515711 TAF1CQ15572 869 aaPredicted RBP13.09□□□□□ -0.31
LMNA-224ENST00000515711 LY6KQ17RY6 165 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 MAEAQ7L5Y9 396 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 DPP9Q86TI2 863 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 MAP4K3Q8IVH8 894 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 FAM186BQ8IYM0 893 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 NEK11Q8NG66 645 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 OR8K1Q8NGG5 319 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 CPLX3Q8WVH0 158 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 EMID1Q96A84 441 aaPredicted RBP13.09□□□□□ -0.31
LMNA-224ENST00000515711 SPATA33Q96N06 139 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 NTPCRQ9BSD7 190 aaKnown RBP13.09□□□□□ -0.31
LMNA-224ENST00000515711 POLR3FQ9H1D9 316 aaPredicted RBP13.09□□□□□ -0.31
LMNA-224ENST00000515711 NUCKS1Q9H1E3 243 aaKnown RBP13.09□□□□□ -0.31
LMNA-224ENST00000515711 DHX33Q9H6R0 707 aaKnown RBP13.09□□□□□ -0.31
LMNA-224ENST00000515711 KMT5AQ9NQR1 393 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 DMAC2Q9NW81 257 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 DAAM1Q9Y4D1 1078 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 TRIM17Q9Y577 477 aa13.09□□□□□ -0.31
LMNA-224ENST00000515711 TTC26A0AVF1 554 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 GTPBP10A4D1E9 387 aaKnown RBP13.08□□□□□ -0.32
LMNA-224ENST00000515711 CCDC169A6NNP5 214 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 SLC16A4O15374 487 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 SORBS3O60504 671 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 AKAP3O75969 853 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 ARIH2O95376 493 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 GH1P01241 217 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 NAMPTP43490 491 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 NPTX2P47972 431 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 CDK17Q00537 523 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 LAMC2Q13753 1193 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 E4F1Q66K89 784 aaPredicted RBP13.08□□□□□ -0.32
LMNA-224ENST00000515711 C17orf53Q8N3J3 647 aaPredicted RBP13.08□□□□□ -0.32
LMNA-224ENST00000515711 TMEM161BQ8NDZ6 487 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 TCP11Q8WWU5 503 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 PCYT2Q99447 389 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 SMARCAD1Q9H4L7 1026 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 BCAS3Q9H6U6 928 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 XPNPEP1Q9NQW7 623 aa13.08□□□□□ -0.32
LMNA-224ENST00000515711 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.08□□□□□ -0.32
LMNA-224ENST00000515711 KIAA0391O15091 583 aaKnown RBP13.07□□□□□ -0.32
LMNA-224ENST00000515711 CLIC2O15247 247 aa13.07□□□□□ -0.32
LMNA-224ENST00000515711 N4BP1O75113 896 aaKnown RBP13.07□□□□□ -0.32
LMNA-224ENST00000515711 CCDC175P0C221 793 aa13.07□□□□□ -0.32
LMNA-224ENST00000515711 KRT13P13646 458 aa13.07□□□□□ -0.32
LMNA-224ENST00000515711 ATP4AP20648 1035 aa13.07□□□□□ -0.32
LMNA-224ENST00000515711 ENPEPQ07075 957 aa13.07□□□□□ -0.32
LMNA-224ENST00000515711 GOLGA8FQ08AF8 430 aa13.07□□□□□ -0.32
LMNA-224ENST00000515711 KCNA1Q09470 495 aa13.07□□□□□ -0.32
LMNA-224ENST00000515711 GOLGA8DPQ0D2H9 430 aa13.07□□□□□ -0.32
LMNA-224ENST00000515711 KCNH2Q12809 1159 aa13.07□□□□□ -0.32
LMNA-224ENST00000515711 TARBP2Q15633 366 aaKnown RBP13.07□□□□□ -0.32
LMNA-224ENST00000515711 PTPN14Q15678 1187 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms