RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 KCNK18Q7Z418 384 aa28.8■■■□□ 2.2
DDR1-279ENST00000515529 SRGAP1Q7Z6B7 1085 aa28.8■■■□□ 2.2
DDR1-279ENST00000515529 SYMPKQ92797 1274 aaKnown RBP28.8■■■□□ 2.2
DDR1-279ENST00000515529 GPRC5CQ9NQ84 441 aa28.8■■■□□ 2.2
DDR1-279ENST00000515529 ZDHHC9Q9Y397 364 aa28.8■■■□□ 2.2
DDR1-279ENST00000515529 MICAL3Q7RTP6 2002 aa28.8■■■□□ 2.2
DDR1-279ENST00000515529 CSDE1O75534 798 aaKnown RBP28.79■■■□□ 2.2
DDR1-279ENST00000515529 UPP2O95045 317 aa28.79■■■□□ 2.2
DDR1-279ENST00000515529 NUCB2P80303 420 aa28.79■■■□□ 2.2
DDR1-279ENST00000515529 CATSPER4Q7RTX7 472 aa28.79■■■□□ 2.2
DDR1-279ENST00000515529 ASAP3Q8TDY4 903 aa28.79■■■□□ 2.2
DDR1-279ENST00000515529 TIFAQ96CG3 184 aa28.79■■■□□ 2.2
DDR1-279ENST00000515529 EPSTI1Q96J88 318 aa28.79■■■□□ 2.2
DDR1-279ENST00000515529 ADAM2Q99965 735 aa28.79■■■□□ 2.2
DDR1-279ENST00000515529 TSPYL2Q9H2G4 693 aaPredicted RBP28.79■■■□□ 2.2
DDR1-279ENST00000515529 TMX1Q9H3N1 280 aa28.79■■■□□ 2.2
DDR1-279ENST00000515529 PLA2G4BP0C869 781 aa28.78■■■□□ 2.2
DDR1-279ENST00000515529 PLCG1P19174 1290 aa28.78■■■□□ 2.2
DDR1-279ENST00000515529 FGFR4P22455 802 aa28.78■■■□□ 2.2
DDR1-279ENST00000515529 GLRA2P23416 452 aa28.78■■■□□ 2.2
DDR1-279ENST00000515529 PBX2P40425 430 aa28.78■■■□□ 2.2
DDR1-279ENST00000515529 KRT85P78386 507 aa28.78■■■□□ 2.2
DDR1-279ENST00000515529 ZNF697Q5TEC3 545 aa28.78■■■□□ 2.2
DDR1-279ENST00000515529 TMCO2Q7Z6W1 182 aaPredicted RBP28.78■■■□□ 2.2
DDR1-279ENST00000515529 KIFAP3Q92845 792 aa28.78■■■□□ 2.2
DDR1-279ENST00000515529 IFT74Q96LB3 600 aa28.78■■■□□ 2.2
DDR1-279ENST00000515529 IFT122Q9HBG6 1241 aa28.78■■■□□ 2.2
DDR1-279ENST00000515529 C1orf112Q9NSG2 853 aa28.78■■■□□ 2.2
DDR1-279ENST00000515529 RNF216Q9NWF9 866 aaPredicted RBP28.78■■■□□ 2.2
DDR1-279ENST00000515529 LRRIQ4A6NIV6 560 aa28.77■■■□□ 2.2
DDR1-279ENST00000515529 CUTAO60888 179 aa28.77■■■□□ 2.2
DDR1-279ENST00000515529 GJB5O95377 273 aa28.77■■■□□ 2.2
DDR1-279ENST00000515529 IBSPP21815 317 aaPredicted RBP28.77■■■□□ 2.2
DDR1-279ENST00000515529 ME1P48163 572 aa28.77■■■□□ 2.2
DDR1-279ENST00000515529 POU5F1BQ06416 359 aa28.77■■■□□ 2.2
DDR1-279ENST00000515529 CAPSQ13938 189 aa28.77■■■□□ 2.2
DDR1-279ENST00000515529 PPP2R5AQ15172 486 aa28.77■■■□□ 2.2
DDR1-279ENST00000515529 TOP1MTQ969P6 601 aa28.77■■■□□ 2.2
DDR1-279ENST00000515529 LRFN2Q9ULH4 789 aa28.77■■■□□ 2.2
DDR1-279ENST00000515529 STAG3L1P0CL83 205 aa28.76■■■□□ 2.19
DDR1-279ENST00000515529 RINT1Q6NUQ1 792 aa28.76■■■□□ 2.19
DDR1-279ENST00000515529 USP49Q70CQ1 688 aa28.76■■■□□ 2.19
DDR1-279ENST00000515529 SYT2Q8N9I0 419 aaPredicted RBP28.76■■■□□ 2.19
DDR1-279ENST00000515529 LINC01599Q8WXQ3 324 aa28.76■■■□□ 2.19
DDR1-279ENST00000515529 RAD9AQ99638 391 aa28.76■■■□□ 2.19
DDR1-279ENST00000515529 RUSC1Q9BVN2 902 aa28.76■■■□□ 2.19
DDR1-279ENST00000515529 TIPINQ9BVW5 301 aa28.76■■■□□ 2.19
DDR1-279ENST00000515529 NKX2-4Q9H2Z4 354 aa28.76■■■□□ 2.19
DDR1-279ENST00000515529 SLC28A3Q9HAS3 691 aa28.76■■■□□ 2.19
DDR1-279ENST00000515529 INO80B-WBP1J3KQ70 363 aa28.75■■■□□ 2.19
DDR1-279ENST00000515529 ERLIN2O94905 339 aa28.75■■■□□ 2.19
DDR1-279ENST00000515529 PTENP60484 403 aa28.75■■■□□ 2.19
DDR1-279ENST00000515529 DHX8Q14562 1220 aaKnown RBP28.75■■■□□ 2.19
DDR1-279ENST00000515529 RRAGBQ5VZM2 374 aa28.75■■■□□ 2.19
DDR1-279ENST00000515529 ZBTB8OSQ8IWT0 167 aa28.75■■■□□ 2.19
DDR1-279ENST00000515529 DRC1Q96MC2 740 aa28.75■■■□□ 2.19
DDR1-279ENST00000515529 YME1L1Q96TA2 773 aa28.75■■■□□ 2.19
DDR1-279ENST00000515529 RGS18Q9NS28 235 aa28.75■■■□□ 2.19
DDR1-279ENST00000515529 DACT1Q9NYF0 836 aa28.75■■■□□ 2.19
DDR1-279ENST00000515529 KCND2Q9NZV8 630 aa28.75■■■□□ 2.19
DDR1-279ENST00000515529 PIN4Q9Y237 131 aaKnown RBP28.75■■■□□ 2.19
DDR1-279ENST00000515529 INSL6Q9Y581 213 aa28.75■■■□□ 2.19
DDR1-279ENST00000515529 TMEM265A0A087WTH1 108 aa28.74■■■□□ 2.19
DDR1-279ENST00000515529 MGEA5O60502 916 aa28.74■■■□□ 2.19
DDR1-279ENST00000515529 MYOGP15173 224 aa28.74■■■□□ 2.19
DDR1-279ENST00000515529 NCBP1Q09161 790 aaKnown RBP28.74■■■□□ 2.19
DDR1-279ENST00000515529 PCBP1Q15365 356 aaKnown RBP eCLIP28.74■■■□□ 2.19
DDR1-279ENST00000515529 CCDC73Q6ZRK6 1079 aa28.74■■■□□ 2.19
DDR1-279ENST00000515529 C1orf186Q6ZWK4 172 aa28.74■■■□□ 2.19
DDR1-279ENST00000515529 SLC24A5Q71RS6 500 aa28.74■■■□□ 2.19
DDR1-279ENST00000515529 RTN4RL1Q86UN2 441 aaPredicted RBP28.74■■■□□ 2.19
DDR1-279ENST00000515529 DEPTORQ8TB45 409 aa28.74■■■□□ 2.19
DDR1-279ENST00000515529 RAD54LQ92698 747 aa28.74■■■□□ 2.19
DDR1-279ENST00000515529 CHST12Q9NRB3 414 aa28.74■■■□□ 2.19
DDR1-279ENST00000515529 YBX2Q9Y2T7 364 aaKnown RBP28.74■■■□□ 2.19
DDR1-279ENST00000515529 HIP1RO75146 1068 aa28.73■■■□□ 2.19
DDR1-279ENST00000515529 KRT18P05783 430 aaKnown RBP28.73■■■□□ 2.19
DDR1-279ENST00000515529 SARSP49591 514 aaKnown RBP28.73■■■□□ 2.19
DDR1-279ENST00000515529 SLC12A3P55017 1021 aa28.73■■■□□ 2.19
DDR1-279ENST00000515529 PPP2R2DQ66LE6 453 aa28.73■■■□□ 2.19
DDR1-279ENST00000515529 GPBP1Q86WP2 473 aa28.73■■■□□ 2.19
DDR1-279ENST00000515529 NPAS4Q8IUM7 802 aa28.73■■■□□ 2.19
DDR1-279ENST00000515529 LARP4BQ92615 738 aaKnown RBP28.73■■■□□ 2.19
DDR1-279ENST00000515529 SPATA32Q96LK8 384 aa28.73■■■□□ 2.19
DDR1-279ENST00000515529 NFKBIZQ9BYH8 718 aa28.73■■■□□ 2.19
DDR1-279ENST00000515529 C2orf40Q9H1Z8 148 aa28.73■■■□□ 2.19
DDR1-279ENST00000515529 STK17AQ9UEE5 414 aa28.73■■■□□ 2.19
DDR1-279ENST00000515529 PCDHB7Q9Y5E2 793 aa28.73■■■□□ 2.19
DDR1-279ENST00000515529 CA3P07451 260 aa28.72■■■□□ 2.19
DDR1-279ENST00000515529 GUCY2CP25092 1073 aa28.72■■■□□ 2.19
DDR1-279ENST00000515529 NAMPTP43490 491 aa28.72■■■□□ 2.19
DDR1-279ENST00000515529 RAD51AP2Q09MP3 1159 aa28.72■■■□□ 2.19
DDR1-279ENST00000515529 MCM6Q14566 821 aa28.72■■■□□ 2.19
DDR1-279ENST00000515529 DSC3Q14574 896 aa28.72■■■□□ 2.19
DDR1-279ENST00000515529 TWF2Q6IBS0 349 aaKnown RBP28.72■■■□□ 2.19
DDR1-279ENST00000515529 IFNLR1Q8IU57 520 aaPredicted RBP28.72■■■□□ 2.19
DDR1-279ENST00000515529 MINDY3Q9H8M7 445 aa28.72■■■□□ 2.19
DDR1-279ENST00000515529 POLD4Q9HCU8 107 aa28.72■■■□□ 2.19
DDR1-279ENST00000515529 RCOR1Q9UKL0 485 aa28.72■■■□□ 2.19
DDR1-279ENST00000515529 DDIT3P35638 169 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms