RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 ARHGAP20Q9P2F6 1191 aa7.71□□□□□ -1.17
LDB2-216ENST00000515064 PRKAG3Q9UGI9 489 aa7.71□□□□□ -1.17
LDB2-216ENST00000515064 SALL4Q9UJQ4 1053 aa7.71□□□□□ -1.17
LDB2-216ENST00000515064 TMEM59LQ9UK28 342 aa7.71□□□□□ -1.17
LDB2-216ENST00000515064 TDRKHQ9Y2W6 561 aaKnown RBP7.71□□□□□ -1.17
LDB2-216ENST00000515064 PCDHB6Q9Y5E3 794 aa7.71□□□□□ -1.17
LDB2-216ENST00000515064 STK24Q9Y6E0 443 aa7.71□□□□□ -1.17
LDB2-216ENST00000515064 BTBD18B2RXH4 712 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 RANBP6O60518 1105 aaKnown RBP7.71□□□□□ -1.18
LDB2-216ENST00000515064 LCA5LO95447 670 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 PDGFRBP09619 1106 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 YBX3P16989 372 aaKnown RBP eCLIP7.71□□□□□ -1.18
LDB2-216ENST00000515064 TRPC1P48995 793 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 TOB1P50616 345 aaPredicted RBP7.71□□□□□ -1.18
LDB2-216ENST00000515064 HAND2P61296 217 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 ACVR2BQ13705 512 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 ITGA9Q13797 1035 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 KHDC1Q4VXA5 237 aaKnown RBP7.71□□□□□ -1.18
LDB2-216ENST00000515064 SMUG1Q53HV7 270 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 MEI1Q5TIA1 1274 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 SPTY2D1Q68D10 685 aaPredicted RBP7.71□□□□□ -1.18
LDB2-216ENST00000515064 LRRC8BQ6P9F7 803 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 ZNF449Q6P9G9 518 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 SLC2A7Q6PXP3 512 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 B3GNT6Q6ZMB0 384 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 TRIM67Q6ZTA4 783 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 ECHDC2Q86YB7 292 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 DIS3L2Q8IYB7 885 aaKnown RBP7.71□□□□□ -1.18
LDB2-216ENST00000515064 NCOA7Q8NI08 942 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 NRG4Q8WWG1 115 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 WASF1Q92558 559 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 SYMPKQ92797 1274 aaKnown RBP7.71□□□□□ -1.18
LDB2-216ENST00000515064 GRAMD1AQ96CP6 724 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 EPSTI1Q96J88 318 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 TGS1Q96RS0 853 aaKnown RBP7.71□□□□□ -1.18
LDB2-216ENST00000515064 OSBPL10Q9BXB5 764 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 DRC3Q9H069 523 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 KIAA1683Q9H0B3 1180 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 METTL14Q9HCE5 456 aaKnown RBP7.71□□□□□ -1.18
LDB2-216ENST00000515064 ZNF212Q9UDV6 495 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 SEC63Q9UGP8 760 aaKnown RBP7.71□□□□□ -1.18
LDB2-216ENST00000515064 CCNL1Q9UK58 526 aaPredicted RBP7.71□□□□□ -1.18
LDB2-216ENST00000515064 PACSIN2Q9UNF0 486 aaPredicted RBP7.71□□□□□ -1.18
LDB2-216ENST00000515064 PLAGL2Q9UPG8 496 aa7.71□□□□□ -1.18
LDB2-216ENST00000515064 USP54Q70EL1 1684 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 MYH8P13535 1937 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 TRIM49BA6NDI0 452 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 PGRMC1O00264 195 aaKnown RBP7.7□□□□□ -1.18
LDB2-216ENST00000515064 KRIT1O00522 736 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 CES2O00748 559 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 KRT36O76013 467 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 STIP1P31948 543 aaKnown RBP7.7□□□□□ -1.18
LDB2-216ENST00000515064 SLC1A4P43007 532 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 MTIF2P46199 727 aaKnown RBP7.7□□□□□ -1.18
LDB2-216ENST00000515064 POLGP54098 1239 aaPredicted RBP7.7□□□□□ -1.18
LDB2-216ENST00000515064 PMS2P54278 862 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 DSG1Q02413 1049 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 RPS6KA1Q15418 735 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 PDCD4Q53EL6 469 aaKnown RBP7.7□□□□□ -1.18
LDB2-216ENST00000515064 FIGNQ5HY92 759 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 RC3H1Q5TC82 1133 aaKnown RBP7.7□□□□□ -1.18
LDB2-216ENST00000515064 MPRIPQ6WCQ1 1025 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 IRF2BP1Q8IU81 584 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 BHMTQ93088 406 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 LRRC37BQ96QE4 947 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 AP1M1Q9BXS5 423 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 DDX47Q9H0S4 455 aaKnown RBP7.7□□□□□ -1.18
LDB2-216ENST00000515064 BHMT2Q9H2M3 363 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 PABPC3Q9H361 631 aaKnown RBP7.7□□□□□ -1.18
LDB2-216ENST00000515064 EURLQ9NYK6 297 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 CLIC5Q9NZA1 410 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 ITM2BQ9Y287 266 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 MAP2P11137 1827 aaKnown RBP7.7□□□□□ -1.18
LDB2-216ENST00000515064 UMODL1Q5DID0 1318 aa7.7□□□□□ -1.18
LDB2-216ENST00000515064 DYTNA2CJ06 578 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 CCDC160A6NGH7 325 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 CCDC188H7C350 402 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 DCTN3O75935 186 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 MMP1P03956 469 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 GSTT2P0CG29 244 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 GSTT2BP0CG30 244 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 HNRNPH3P31942 346 aaKnown RBP7.69□□□□□ -1.18
LDB2-216ENST00000515064 PRCPP42785 496 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 CDR2Q01850 454 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 GFPT1Q06210 699 aaPredicted RBP7.69□□□□□ -1.18
LDB2-216ENST00000515064 SSRP1Q08945 709 aaKnown RBP7.69□□□□□ -1.18
LDB2-216ENST00000515064 MGAT5Q09328 741 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 TBL3Q12788 808 aaKnown RBP7.69□□□□□ -1.18
LDB2-216ENST00000515064 GIT2Q14161 759 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 WDR72Q3MJ13 1102 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 CCDC153Q494R4 210 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 POTEEQ6S8J3 1075 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 C4orf50Q6ZRC1 276 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 MICU3Q86XE3 530 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 MB21D2Q8IYB1 491 aaPredicted RBP7.69□□□□□ -1.18
LDB2-216ENST00000515064 ANKRD42Q8N9B4 389 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.69□□□□□ -1.18
LDB2-216ENST00000515064 FNDC8Q8TC99 324 aa7.69□□□□□ -1.18
LDB2-216ENST00000515064 HNRNPABQ99729 332 aaKnown RBP7.69□□□□□ -1.18
LDB2-216ENST00000515064 SLC26A6Q9BXS9 759 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms