RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 LINC01356Q8N9X3 169 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 TXNDC5Q8NBS9 432 aaKnown RBP6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 GAB3Q8WWW8 586 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 JADE3Q92613 823 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 DYDC2Q96IM9 177 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 RAX2Q96IS3 184 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 SLC2A13Q96QE2 648 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 XPOTO43592 962 aaKnown RBP6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 NUAK1O60285 661 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 ABLIM3O94929 683 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 PARNO95453 639 aaKnown RBP6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 CDK17Q00537 523 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 FZD5Q13467 585 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 PIN1Q13526 163 aaPredicted RBP6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 PKN1Q16512 942 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 NFE2Q16621 373 aaPredicted RBP6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 LCE1DQ5T752 114 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 Q6ZUG5 572 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 PNMA8AQ86V59 439 aaPredicted RBP6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 OR14C36Q8NHC7 312 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 ADAMTS17Q8TE56 1095 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 AUTS2Q8WXX7 1259 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 NKD2Q969F2 451 aaPredicted RBP6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 MBD6Q96DN6 1003 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 TEKT5Q96M29 485 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 KATNBL1Q9H079 304 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 POLR3BQ9NW08 1133 aaPredicted RBP6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 DNAI1Q9UI46 699 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 PTPN22Q9Y2R2 807 aa6.89□□□□□ -1.31
HMGCS1-207ENST00000514610 KLHL33A6NCF5 533 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 SEC24DO94855 1032 aaPredicted RBP6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 CSF2RBP32927 897 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 CCT2P78371 535 aaKnown RBP6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 ACAP2Q15057 778 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 TRIM68Q6AZZ1 485 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 ZNF761Q86XN6 746 aaPredicted RBP6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 RSAD2Q8WXG1 361 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 AJUBAQ96IF1 538 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 HIST1H2AHQ96KK5 128 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 HIST1H2AJQ99878 128 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 RHOBTB2Q9BYZ6 727 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 TMEM168Q9H0V1 697 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 IFT122Q9HBG6 1241 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 SAE1Q9UBE0 346 aaPredicted RBP6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 TUBD1Q9UJT1 453 aa6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 LUC7L2Q9Y383 392 aaKnown RBP6.88□□□□□ -1.31
HMGCS1-207ENST00000514610 ZRANB2O95218 330 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 HMGCRP04035 888 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 ZNF888P0CJ79 500 aaPredicted RBP6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 HNRNPLP14866 589 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 C5AR1P21730 350 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 CCND1P24385 295 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 GPR15P49685 360 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 SLURP1P55000 103 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 SPIDRQ14159 915 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 FAM26FQ5R3K3 315 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 TMEM240Q5SV17 173 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 GPR155Q7Z3F1 870 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 CMTR2Q8IYT2 770 aaKnown RBP6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 CPA6Q8N4T0 437 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 PPP1R14CQ8TAE6 165 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 KIAA1683Q9H0B3 1180 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 CDH19Q9H159 772 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 ZIM2Q9NZV7 527 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 IP6K2Q9UHH9 426 aa6.87□□□□□ -1.31
HMGCS1-207ENST00000514610 SNUPNO95149 360 aaKnown RBP6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 SCGB1D2O95969 90 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 CYP1A1P04798 512 aaPredicted RBP6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 MTHFD2P13995 350 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 RECQLP46063 649 aaPredicted RBP6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 PCOLCEQ15113 449 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 TCERG1LQ5VWI1 586 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 CIAPIN1Q6FI81 312 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 C1QL4Q86Z23 238 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 TMEM151BQ8IW70 566 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 REXO1L1PQ8IX06 675 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 IFNL2Q8IZJ0 200 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 ADAM29Q9UKF5 820 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 INVSQ9Y283 1065 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 MRFAP1Q9Y605 127 aa6.86□□□□□ -1.31
HMGCS1-207ENST00000514610 MAFGO15525 162 aa6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 CFPP27918 469 aa6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 RRADP55042 308 aa6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 CD69Q07108 199 aa6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 MGAT5Q09328 741 aa6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 ZNF827Q17R98 1081 aa6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 CCDC178Q5BJE1 867 aa6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 MBNL2Q5VZF2 373 aaKnown RBP6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 KLHL36Q8N4N3 616 aa6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 TSR2Q969E8 191 aaKnown RBP6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 WDR92Q96MX6 357 aa6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 TCF7L1Q9HCS4 588 aa6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 LUC7LQ9NQ29 371 aaKnown RBP6.85□□□□□ -1.31
HMGCS1-207ENST00000514610 C9orf118A6NHY6 69 aa6.84□□□□□ -1.31
HMGCS1-207ENST00000514610 TSPAN6O43657 245 aa6.84□□□□□ -1.31
HMGCS1-207ENST00000514610 MARCH6O60337 910 aa6.84□□□□□ -1.31
HMGCS1-207ENST00000514610 NDUFS2O75306 463 aa6.84□□□□□ -1.31
HMGCS1-207ENST00000514610 ZSCAN20P17040 1043 aaPredicted RBP6.84□□□□□ -1.31
HMGCS1-207ENST00000514610 MRE11P49959 708 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms