RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 DRAP1Q14919 205 aaPredicted RBP8.93□□□□□ -0.98
CPNE4-211ENST00000514439 XKR9Q5GH70 373 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 MEI1Q5TIA1 1274 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 XRRA1Q6P2D8 792 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 VPS36Q86VN1 386 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 VSIG10LQ86VR7 867 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 MSL3Q8N5Y2 521 aaKnown RBP8.93□□□□□ -0.98
CPNE4-211ENST00000514439 OLIG1Q8TAK6 271 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 GPRASP2Q96D09 838 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 CBWD1Q9BRT8 395 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 STK33Q9BYT3 514 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 PDE11AQ9HCR9 933 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 ZNF214Q9UL59 606 aaPredicted RBP8.93□□□□□ -0.98
CPNE4-211ENST00000514439 PARP14Q460N5 1801 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 ATP8B3O60423 1300 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 LRRIQ3A6PVS8 624 aaPredicted RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 SLC16A4O15374 487 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 MYBL2P10244 700 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 KRT13P13646 458 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 PAFAH1B1P43034 410 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 MATR3P43243 847 aaKnown RBP eCLIP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 OAZ1P54368 228 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 PEX3P56589 373 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 DLG4P78352 724 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 TMEM132BQ14DG7 1078 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 MAP9Q49MG5 647 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 CCDC70Q6NSX1 233 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 INTS8Q75QN2 995 aaKnown RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 NLRX1Q86UT6 975 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 C12orf56Q8IXR9 622 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 GSPT2Q8IYD1 628 aaKnown RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 TMEM174Q8WUU8 243 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 MS4A14Q96JA4 679 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 INPP4AQ96PE3 977 aaPredicted RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 SGIP1Q9BQI5 828 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 LRRC1Q9BTT6 524 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 TIPINQ9BVW5 301 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 GPR88Q9GZN0 384 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 ST6GALNAC4Q9H4F1 302 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 ZCCHC17Q9NP64 241 aaKnown RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 ANKEF1Q9NU02 776 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 GGA3Q9NZ52 723 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 HSPBP1Q9NZL4 362 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 APEX2Q9UBZ4 518 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 ADAMTS5Q9UNA0 930 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 PACSIN2Q9UNF0 486 aaPredicted RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 EMSYQ7Z589 1322 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 C19orf81C9J6K1 198 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 EIF3JO75822 258 aaKnown RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 NCKAP1LP55160 1127 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 CFAP221Q4G0U5 840 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 FAM102BQ5T8I3 360 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 ZNF746Q6NUN9 644 aaPredicted RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 ANO5Q75V66 913 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 XXYLT1Q8NBI6 393 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 ZSWIM2Q8NEG5 633 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 RDM1Q8NG50 284 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 LMO3Q8TAP4 145 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 LNX1Q8TBB1 728 aaPredicted RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 NSUN6Q8TEA1 469 aaKnown RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 U2AF1L4Q8WU68 220 aaKnown RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 HDAC7Q8WUI4 952 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 KLRG1Q96E93 195 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 MOV10L1Q9BXT6 1211 aaKnown RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 RBM12Q9NTZ6 932 aaKnown RBP8.92□□□□□ -0.98
CPNE4-211ENST00000514439 RNF14Q9UBS8 474 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 PHIPQ8WWQ0 1821 aa8.92□□□□□ -0.98
CPNE4-211ENST00000514439 SSC5DA1L4H1 1573 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 RLFQ13129 1914 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 RGS20O76081 388 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 H2AFZP0C0S5 128 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 KCNA2P16389 499 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 TNNT3P45378 269 aaPredicted RBP8.91□□□□□ -0.98
CPNE4-211ENST00000514439 NOP2P46087 812 aaKnown RBP8.91□□□□□ -0.98
CPNE4-211ENST00000514439 VAMP7P51809 220 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 MRPS25P82663 173 aaKnown RBP8.91□□□□□ -0.98
CPNE4-211ENST00000514439 PPP3CAQ08209 521 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 GPS2Q13227 327 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 R3HDM1Q15032 1099 aaKnown RBP8.91□□□□□ -0.98
CPNE4-211ENST00000514439 PHLDB3Q6NSJ2 640 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 CCNI2Q6ZMN8 369 aaPredicted RBP8.91□□□□□ -0.98
CPNE4-211ENST00000514439 H2AFVQ71UI9 128 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 GLYCTKQ8IVS8 523 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 LRRC57Q8N9N7 239 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 SLC30A5Q8TAD4 765 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 ZBTB9Q96C00 473 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 SENP7Q9BQF6 1050 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 SYT11Q9BT88 431 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 TEX13BQ9BXU2 312 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 GOLPH3Q9H4A6 298 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 A1CFQ9NQ94 594 aaKnown RBP8.91□□□□□ -0.98
CPNE4-211ENST00000514439 GPRC5DQ9NZD1 345 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 DMGDHQ9UI17 866 aaKnown RBP8.91□□□□□ -0.98
CPNE4-211ENST00000514439 DAAM1Q9Y4D1 1078 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 PCDHA10Q9Y5I2 948 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 UTRNP46939 3433 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 ATP2A1O14983 1001 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 MAFGO15525 162 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 ZNF862O60290 1169 aa8.91□□□□□ -0.98
CPNE4-211ENST00000514439 RFX1P22670 979 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms