RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 LMCD1Q9NZU5 365 aa22.42■■□□□ 1.18
USP53-208ENST00000514305 DBR1Q9UK59 544 aaKnown RBP22.42■■□□□ 1.18
USP53-208ENST00000514305 A0A1W2PQ27 194 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 A0A1W2PQ64 194 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 A0A1W2PQD8 194 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 PP2D1A8MPX8 630 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 ZNF862O60290 1169 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 LPXNO60711 386 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 INSRRP14616 1297 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 CMA1P23946 247 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 TMOD1P28289 359 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 CDC25AP30304 524 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 GRIK4Q16099 956 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 UGCGQ16739 394 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 AXDND1Q5T1B0 1012 aaPredicted RBP22.41■■□□□ 1.18
USP53-208ENST00000514305 TRMT1LQ7Z2T5 733 aaKnown RBP22.41■■□□□ 1.18
USP53-208ENST00000514305 IFIH1Q9BYX4 1025 aaKnown RBP22.41■■□□□ 1.18
USP53-208ENST00000514305 NLRC5Q86WI3 1866 aa22.41■■□□□ 1.18
USP53-208ENST00000514305 ARHGEF35A5YM69 484 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 GAS2O43903 313 aaKnown RBP22.4■■□□□ 1.18
USP53-208ENST00000514305 ATP4AP20648 1035 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 HTRA4P83105 476 aaPredicted RBP22.4■■□□□ 1.18
USP53-208ENST00000514305 GRIN1Q05586 938 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 TBC1D8BQ0IIM8 1120 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 XKR9Q5GH70 373 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 FAM26DQ5JW98 314 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 HLA-CQ95604 372 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 EPSTI1Q96J88 318 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 YME1L1Q96TA2 773 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 MMTAG2Q9BU76 263 aaKnown RBP22.4■■□□□ 1.18
USP53-208ENST00000514305 SUGCTQ9HAC7 445 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 GDPD2Q9HCC8 539 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 STK17AQ9UEE5 414 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 TUBE1Q9UJT0 475 aa22.4■■□□□ 1.18
USP53-208ENST00000514305 XIRP2A4UGR9 3374 aa22.39■■□□□ 1.18
USP53-208ENST00000514305 RFC5P40937 340 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 DNM2P50570 870 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 SPECC1Q5M775 1068 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 RESP18Q5W5W9 173 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 POTEGQ6S5H5 508 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 RPAINQ86UA6 219 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 ZNF710Q8N1W2 664 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 IQUBQ8NA54 791 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 FBXO22Q8NEZ5 403 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 SLC7A3Q8WY07 619 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 TOP1MTQ969P6 601 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 LRRC27Q9C0I9 530 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 CUEDC2Q9H467 287 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 CYP26B1Q9NR63 512 aa22.39■■□□□ 1.17
USP53-208ENST00000514305 MUC3AQ02505 3323 aa22.38■■□□□ 1.17
USP53-208ENST00000514305 UPP2O95045 317 aa22.38■■□□□ 1.17
USP53-208ENST00000514305 EYA4O95677 639 aa22.38■■□□□ 1.17
USP53-208ENST00000514305 STAT6P42226 847 aa22.38■■□□□ 1.17
USP53-208ENST00000514305 IGBP1P78318 339 aa22.38■■□□□ 1.17
USP53-208ENST00000514305 KARSQ15046 597 aaKnown RBP22.38■■□□□ 1.17
USP53-208ENST00000514305 MTERF2Q49AM1 385 aa22.38■■□□□ 1.17
USP53-208ENST00000514305 ANO5Q75V66 913 aa22.38■■□□□ 1.17
USP53-208ENST00000514305 TMEM87AQ8NBN3 555 aa22.38■■□□□ 1.17
USP53-208ENST00000514305 MRPS27Q92552 414 aaKnown RBP22.38■■□□□ 1.17
USP53-208ENST00000514305 SAMD11Q96NU1 681 aa22.38■■□□□ 1.17
USP53-208ENST00000514305 USP25Q9UHP3 1055 aa22.38■■□□□ 1.17
USP53-208ENST00000514305 MYH9P35579 1960 aaKnown RBP22.38■■□□□ 1.17
USP53-208ENST00000514305 RALGAPA2Q2PPJ7 1873 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 RBAK-RBAKDNI3L0D1 243 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 DGAT1O75907 488 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 BMP1P13497 986 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 KCNQ1P51787 676 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 POLGP54098 1239 aaPredicted RBP22.37■■□□□ 1.17
USP53-208ENST00000514305 CDC42EP1Q00587 391 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 AMPD3Q01432 767 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 TMEM119Q4V9L6 283 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 SHC4Q6S5L8 630 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 RUFY4Q6ZNE9 571 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 PIGOQ8TEQ8 1089 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 C17orf80Q9BSJ5 609 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 OSBPL7Q9BZF2 842 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 MAGEF1Q9HAY2 307 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 KCND2Q9NZV8 630 aa22.37■■□□□ 1.17
USP53-208ENST00000514305 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.36■■□□□ 1.17
USP53-208ENST00000514305 CHRNA1P02708 482 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 GHRP10912 638 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 PLCG1P19174 1290 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 KLRC1P26715 233 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 RARRES1P49788 294 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 TARBP2Q15633 366 aaKnown RBP22.36■■□□□ 1.17
USP53-208ENST00000514305 MTHFD1LQ6UB35 978 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 MAMSTRQ6ZN01 415 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 CEP57L1Q8IYX8 460 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 NME8Q8N427 588 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 TCP11Q8WWU5 503 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 CHAMP1Q96JM3 812 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 TIPINQ9BVW5 301 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 WRAP73Q9P2S5 460 aaPredicted RBP22.36■■□□□ 1.17
USP53-208ENST00000514305 KCNH3Q9ULD8 1083 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 PCDHA2Q9Y5H9 948 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 COL4A6Q14031 1691 aa22.36■■□□□ 1.17
USP53-208ENST00000514305 SMIM35A0A1B0GVV1 85 aa22.35■■□□□ 1.17
USP53-208ENST00000514305 MBLAC1A4D2B0 266 aaPredicted RBP22.35■■□□□ 1.17
USP53-208ENST00000514305 STBD1O95210 358 aa22.35■■□□□ 1.17
USP53-208ENST00000514305 SV2BQ7L1I2 683 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms