RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TOM1L1O75674 476 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 KCNJ1P48048 391 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 LRRC23Q53EV4 343 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 GJB7Q6PEY0 223 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 CENPUQ71F23 418 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 ABTB1Q969K4 478 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 VTI1AQ96AJ9 217 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 MTMR8Q96EF0 704 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 TRIM55Q9BYV6 548 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 PPARGC1AQ9UBK2 798 aaKnown RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 TCP10L2B9ZVM9 353 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 STXBP3O00186 592 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 TRPA1O75762 1119 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 USP11P51784 963 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 SH2D4BQ5SQS7 431 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 JAMLQ86YT9 394 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 ZNF512BQ96KM6 892 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 CCDC17Q96LX7 622 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 DHX36Q9H2U1 1008 aaKnown RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 STK10O94804 968 aaKnown RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 ARHGAP4P98171 946 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 BRDTQ58F21 947 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 MAP3K21Q5TCX8 1036 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 TMCO4Q5TGY1 634 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 TRIM11Q96F44 468 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 CFAP36Q96G28 342 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 DDX27Q96GQ7 796 aaKnown RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 CALN1Q9BXU9 219 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 YY1AP1Q9H869 796 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 TMBIM4Q9HC24 238 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 KMT5AQ9NQR1 393 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 FAM217BQ9NTX9 383 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 ANGPTL2Q9UKU9 493 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 G3BP2Q9UN86 482 aaKnown RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 ARHGEF28Q8N1W1 1705 aaKnown RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 ATP5HO75947 161 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 RNF8O76064 485 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 NMT1P30419 496 aaKnown RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 AARSP49588 968 aaKnown RBP eCLIP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 PEX3P56589 373 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 ARHGEF16Q5VV41 709 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 FRMD5Q7Z6J6 570 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 ADGRF4Q8IZF3 695 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 DTX3LQ8TDB6 740 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 BAZ2BQ9UIF8 2168 aaKnown RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 TMEM120BA0PK00 339 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 KITP10721 976 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 C12orf60Q5U649 245 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 CLEC10AQ8IUN9 316 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 PIP4K2CQ8TBX8 421 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 WDR11Q9BZH6 1224 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 MRPL47Q9HD33 250 aaKnown RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 CCPG1Q9ULG6 757 aa8.31□□□□□ -1.08
CLCN3-209ENST00000513761 FAF1Q9UNN5 650 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-209ENST00000513761 ABCA9Q8IUA7 1624 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 HAUS5O94927 633 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 CD58P19256 250 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 CACNB3P54284 484 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 PDE1BQ01064 536 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 GRAMD1BQ3KR37 738 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 DNAJC24Q6P3W2 148 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 AENQ8WTP8 325 aaKnown RBP8.3□□□□□ -1.08
CLCN3-209ENST00000513761 C9orf72Q96LT7 481 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 TTC1Q99614 292 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 SEMA6BQ9H3T3 888 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 Q9H521 79 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 SKAP2O75563 359 aaPredicted RBP8.3□□□□□ -1.08
CLCN3-209ENST00000513761 BMP3P12645 472 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 PKN1Q16512 942 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 SYDE2Q5VT97 1194 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 LONP2Q86WA8 852 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 SMYD3Q9H7B4 428 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 CAND2O75155 1236 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 MYCNP04198 464 aaPredicted RBP8.3□□□□□ -1.08
CLCN3-209ENST00000513761 SSTR3P32745 418 aaPredicted RBP8.3□□□□□ -1.08
CLCN3-209ENST00000513761 ERP27Q96DN0 273 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 SNF8Q96H20 258 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 ERP44Q9BS26 406 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 RGL1Q9NZL6 768 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 SEPT10Q9P0V9 454 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 CLDN3O15551 220 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 PRLRP16471 622 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 CREG2Q8IUH2 290 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 FBXL16Q8N461 479 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 FAM118BQ9BPY3 351 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 C11orf70Q9BRQ4 267 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 TUBB6Q9BUF5 446 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 ZWILCHQ9H900 591 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 DDX20Q9UHI6 824 aaKnown RBP8.3□□□□□ -1.08
CLCN3-209ENST00000513761 KIDINS220Q9ULH0 1771 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 TULP2O00295 520 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 LMNAP02545 664 aaKnown RBP8.3□□□□□ -1.08
CLCN3-209ENST00000513761 MYBP10242 640 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 BARGINQ6ZT62 677 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 TMEM139Q8IV31 216 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 CAVIN3Q969G5 261 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 FAM161BQ96MY7 647 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 PPLO60437 1756 aa8.3□□□□□ -1.08
CLCN3-209ENST00000513761 RASSF10A6NK89 507 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms