RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 TELO2Q9Y4R8 837 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 FAM221BA6H8Z2 402 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 RRN3P2A6NIE6 340 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 SEC24BO95487 1268 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 SNHG28P0DPA3 235 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 GNAT2P19087 354 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 CCND2P30279 289 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 IGBP1P78318 339 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 SATB1Q01826 763 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 PPARAQ07869 468 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 DSC3Q14574 896 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 GNPTABQ3T906 1256 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 CLLU1OSQ5K130 101 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 DAB2IPQ5VWQ8 1189 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 ZNF605Q86T29 641 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 NME8Q8N427 588 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 TMEM40Q8WWA1 233 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 PHKBQ93100 1093 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 IGSF21Q96ID5 467 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 LRIG1Q96JA1 1093 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 TMEM47Q9BQJ4 181 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 MRPL9Q9BYD2 267 aaKnown RBP10.86□□□□□ -0.67
CLCN3-208ENST00000512813 DPP7Q9UHL4 492 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 ST3GAL5Q9UNP4 418 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 PCDHGA5Q9Y5G8 931 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 PCDHA2Q9Y5H9 948 aa10.86□□□□□ -0.67
CLCN3-208ENST00000512813 SPTAN1Q13813 2472 aaKnown RBP10.86□□□□□ -0.67
CLCN3-208ENST00000512813 C4orf47A7E2U8 309 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 OPLAHO14841 1288 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 GPR182O15218 404 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 GPAA1O43292 621 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 LILRB3O75022 631 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 RFPL2O75678 378 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 PAPSS2O95340 614 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-208ENST00000512813 CFBP00751 764 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 CT47B1P0C2W7 299 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-208ENST00000512813 MARK3P27448 753 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 TCF7P36402 384 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-208ENST00000512813 RAP1GAPP47736 663 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 CXCL12P48061 93 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 SEMA3FQ13275 785 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 IFNL3Q8IZI9 196 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 BCL7CQ8WUZ0 217 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-208ENST00000512813 INPP4AQ96PE3 977 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-208ENST00000512813 UBL7Q96S82 380 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-208ENST00000512813 MKNK1Q9BUB5 465 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 VN1R3Q9BXE9 311 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 BOLA2Q9H3K6 86 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 SMOC1Q9H4F8 434 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 VPS45Q9NRW7 570 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 EXOC6BQ9Y2D4 811 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 PCDHA1Q9Y5I3 950 aa10.85□□□□□ -0.67
CLCN3-208ENST00000512813 SMIM35A0A1B0GVV1 85 aa10.84□□□□□ -0.67
CLCN3-208ENST00000512813 SPATA31C2B4DYI2 1134 aa10.84□□□□□ -0.67
CLCN3-208ENST00000512813 J3QKU1 62 aa10.84□□□□□ -0.67
CLCN3-208ENST00000512813 APPP05067 770 aa10.84□□□□□ -0.67
CLCN3-208ENST00000512813 INSRRP14616 1297 aa10.84□□□□□ -0.67
CLCN3-208ENST00000512813 ATP5JP18859 108 aa10.84□□□□□ -0.67
CLCN3-208ENST00000512813 MPLP40238 635 aa10.84□□□□□ -0.67
CLCN3-208ENST00000512813 GPATCH4Q5T3I0 446 aaKnown RBP10.84□□□□□ -0.67
CLCN3-208ENST00000512813 HNRNPLLQ8WVV9 542 aaKnown RBP10.84□□□□□ -0.67
CLCN3-208ENST00000512813 OSBP2Q969R2 916 aa10.84□□□□□ -0.67
CLCN3-208ENST00000512813 ZFP91Q96JP5 570 aaPredicted RBP10.84□□□□□ -0.67
CLCN3-208ENST00000512813 PIDD1Q9HB75 910 aa10.84□□□□□ -0.67
CLCN3-208ENST00000512813 MAP3K20Q9NYL2 800 aaKnown RBP10.84□□□□□ -0.67
CLCN3-208ENST00000512813 STK39Q9UEW8 545 aa10.84□□□□□ -0.67
CLCN3-208ENST00000512813 CACNA1EQ15878 2313 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 K7ESF4 209 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 FIBPO43427 364 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 ZC3H11AO75152 810 aaKnown RBP eCLIP10.83□□□□□ -0.68
CLCN3-208ENST00000512813 STAM2O75886 525 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 GLUD1P00367 558 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 SP4Q02446 784 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 SRSF1Q07955 248 aaKnown RBP eCLIP10.83□□□□□ -0.68
CLCN3-208ENST00000512813 TCEAL6Q6IPX3 200 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 FAM228AQ86W67 206 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 ECHDC2Q86YB7 292 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 TMEFF1Q8IYR6 380 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 CLASRPQ8N2M8 674 aaKnown RBP10.83□□□□□ -0.68
CLCN3-208ENST00000512813 RHPN1Q8TCX5 695 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 HDAC7Q8WUI4 952 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 SLC39A7Q92504 469 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 APPBP2Q92624 585 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 TCEAL3Q969E4 200 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 SENP7Q9BQF6 1050 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 PHF20Q9BVI0 1012 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 NACAP1Q9BZK3 213 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 CPVLQ9H3G5 476 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 C1orf115Q9H7X2 142 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 HEBP1Q9NRV9 189 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 ZDHHC7Q9NXF8 308 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 CDH7Q9ULB5 785 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 NDRG2Q9UN36 371 aaKnown RBP10.83□□□□□ -0.68
CLCN3-208ENST00000512813 MYH6P13533 1939 aa10.83□□□□□ -0.68
CLCN3-208ENST00000512813 PATL2C9JE40 543 aaKnown RBP10.82□□□□□ -0.68
CLCN3-208ENST00000512813 RANBP6O60518 1105 aaKnown RBP10.82□□□□□ -0.68
CLCN3-208ENST00000512813 ADH1AP07327 375 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 IFIT2P09913 472 aaKnown RBP10.82□□□□□ -0.68
CLCN3-208ENST00000512813 TRIM27P14373 513 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 FSHRP23945 695 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms