RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 OSMP13725 252 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TMEM11P17152 192 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 GAP43P17677 238 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 GNAT2P19087 354 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TFEBP19484 476 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TXLNAP40222 546 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 SUMO1P63165 101 aaKnown RBP6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 NCAPHQ15003 741 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 NTRK3Q16288 839 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 GNPTABQ3T906 1256 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 SLC9C2Q5TAH2 1124 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 BROXQ5VW32 411 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 ARHGAP11AQ6P4F7 1023 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 BEND5Q7L4P6 421 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 DPP9Q86TI2 863 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 VSIG10LQ86VR7 867 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TCP11L2Q8N4U5 519 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 FAM160A2Q8N612 972 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 NACC2Q96BF6 587 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 IPO9Q96P70 1041 aaKnown RBP6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TM9SF2Q99805 663 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TREX2Q9BQ50 279 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 C2orf40Q9H1Z8 148 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 OBP2BQ9NPH6 170 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 ATP23Q9Y6H3 246 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 HFM1A2PYH4 1435 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 WDR64B1ANS9 1081 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 AP3B1O00203 1094 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 CACNB4O00305 520 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TRAF5O00463 557 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 SGSM2O43147 1006 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 FSBPO95073 299 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 CAPNS1P04632 268 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TSPY4P0CV99 314 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TSPY10P0CW01 314 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 ESRRAP11474 423 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 IL11P20809 199 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 C5AR1P21730 350 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 VEGFBP49765 207 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 CCR5P51681 352 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 SP140Q13342 867 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TNIP1Q15025 636 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 DLGAP5Q15398 846 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 USP51Q70EK9 711 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZFPM1Q8IX07 1006 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 SH3RF3Q8TEJ3 882 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TRAPPC12Q8WVT3 735 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 HERVK_113Q902F9 699 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 GAL3ST3Q96A11 431 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 HSH2DQ96JZ2 352 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 DACH2Q96NX9 599 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 PREX2Q70Z35 1606 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 TTC37Q6PGP7 1564 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 DAPK1P53355 1430 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 DHX57Q6P158 1386 aaKnown RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 A0A1W2PPL8 197 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 K7EPI3 171 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 ADAMTS3O15072 1205 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 FFAR2O15552 330 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 SMPD2O60906 423 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 SLC22A3O75751 556 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 CFBP00751 764 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 HARSP12081 509 aaKnown RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 ATP2A2P16615 1042 aaKnown RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 MC4RP32245 332 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 ATP5OP48047 213 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 CENPAP49450 140 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 ARL4CP56559 192 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 BEX3Q00994 111 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 DDR1Q08345 913 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 LRMPQ12912 555 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 SLC14A1Q13336 389 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 EIF4A2Q14240 407 aaKnown RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 LASP1Q14847 261 aaKnown RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 SART3Q15020 963 aaKnown RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 PDCD1Q15116 288 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 TAF7Q15545 349 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 SPRED3Q2MJR0 410 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 PRR16Q569H4 304 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZMYM1Q5SVZ6 1142 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 THAP5Q7Z6K1 395 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 MOGAT3Q86VF5 341 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZNF227Q86WZ6 799 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 SYTL1Q8IYJ3 562 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 THEMISQ8N1K5 641 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 LRRC43Q8N309 656 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 LRRN4CLQ8ND94 238 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 OR10H5Q8NGA6 315 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 STK35Q8TDR2 534 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 RBM14Q96PK6 669 aaKnown RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 HHIPQ96QV1 700 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 KCTD15Q96SI1 283 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 OR10A4Q9H209 315 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 SEC31BQ9NQW1 1179 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZNF277Q9NRM2 450 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 CTNNA3Q9UI47 895 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 COLQQ9Y215 455 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 COQ6Q9Y2Z9 468 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 ABCC5O15440 1437 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 LACTBL1A8MY62 500 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms