RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 RPS6P62753 249 aaKnown RBP14.06□□□□□ -0.16
HMGB2-205ENST00000511316 SETQ01105 290 aaPredicted RBP14.06□□□□□ -0.16
HMGB2-205ENST00000511316 GHRHRQ02643 423 aa14.06□□□□□ -0.16
HMGB2-205ENST00000511316 IFI16Q16666 785 aaKnown RBP14.06□□□□□ -0.16
HMGB2-205ENST00000511316 MIIPQ5JXC2 388 aa14.06□□□□□ -0.16
HMGB2-205ENST00000511316 C8orf74Q6P047 294 aa14.06□□□□□ -0.16
HMGB2-205ENST00000511316 MMS22LQ6ZRQ5 1243 aa14.06□□□□□ -0.16
HMGB2-205ENST00000511316 YTHDF3Q7Z739 585 aaKnown RBP14.06□□□□□ -0.16
HMGB2-205ENST00000511316 NEK8Q86SG6 692 aa14.06□□□□□ -0.16
HMGB2-205ENST00000511316 MORC4Q8TE76 937 aa14.06□□□□□ -0.16
HMGB2-205ENST00000511316 TACO1Q9BSH4 297 aaKnown RBP14.06□□□□□ -0.16
HMGB2-205ENST00000511316 NDST4Q9H3R1 872 aa14.06□□□□□ -0.16
HMGB2-205ENST00000511316 COL20A1Q9P218 1284 aa14.06□□□□□ -0.16
HMGB2-205ENST00000511316 TRIM10Q9UDY6 481 aa14.06□□□□□ -0.16
HMGB2-205ENST00000511316 MACROD2A1Z1Q3 448 aa14.05□□□□□ -0.16
HMGB2-205ENST00000511316 TULP1O00294 542 aaPredicted RBP14.05□□□□□ -0.16
HMGB2-205ENST00000511316 KIAA0754O94854 1291 aa14.05□□□□□ -0.16
HMGB2-205ENST00000511316 PLCG1P19174 1290 aa14.05□□□□□ -0.16
HMGB2-205ENST00000511316 USH1GQ495M9 461 aa14.05□□□□□ -0.16
HMGB2-205ENST00000511316 MFSD14CQ5VZR4 134 aa14.05□□□□□ -0.16
HMGB2-205ENST00000511316 SLC30A10Q6XR72 485 aa14.05□□□□□ -0.16
HMGB2-205ENST00000511316 SND1Q7KZF4 910 aaKnown RBP eCLIP14.05□□□□□ -0.16
HMGB2-205ENST00000511316 LACRTQ9GZZ8 138 aa14.05□□□□□ -0.16
HMGB2-205ENST00000511316 AGPAT5Q9NUQ2 364 aa14.05□□□□□ -0.16
HMGB2-205ENST00000511316 SLC5A4Q9NY91 659 aa14.05□□□□□ -0.16
HMGB2-205ENST00000511316 MAPK8IP1Q9UQF2 711 aa14.05□□□□□ -0.16
HMGB2-205ENST00000511316 PLXNA1Q9UIW2 1896 aa14.05□□□□□ -0.16
HMGB2-205ENST00000511316 SYNGAP1Q96PV0 1343 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 PNMA6FA0A0J9YX94 578 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 hCG_1642624A0A1W2PR95 340 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 AGPSO00116 658 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 ADCY6O43306 1168 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 MAGEA1P43355 309 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 PMS1P54277 932 aaKnown RBP14.04□□□□□ -0.16
HMGB2-205ENST00000511316 PDE4CQ08493 712 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 PDIA5Q14554 519 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 ANKRD40Q6AI12 368 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 RPAINQ86UA6 219 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 FBXO11Q86XK2 927 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 CEP89Q96ST8 783 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 LRWD1Q9UFC0 647 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 SIK3Q9Y2K2 1263 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 PFASO15067 1338 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 BTNL10A8MVZ5 291 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 STXBP3O00186 592 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 ERLIN2O94905 339 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 FXR2P51116 673 aaKnown RBP eCLIP14.04□□□□□ -0.161e-6■□□□□ 9.7
HMGB2-205ENST00000511316 DRP2Q13474 957 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 SWT1Q5T5J6 900 aaKnown RBP14.04□□□□□ -0.16
HMGB2-205ENST00000511316 NSMFQ6X4W1 530 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 CDK5RAP3Q96JB5 506 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 CEP63Q96MT8 703 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 AMNQ9BXJ7 453 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 CEP72Q9P209 647 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 SEC63Q9UGP8 760 aaKnown RBP14.04□□□□□ -0.16
HMGB2-205ENST00000511316 PNMA2Q9UL42 364 aa14.04□□□□□ -0.16
HMGB2-205ENST00000511316 HMGB1P1B2RPK0 211 aaPredicted RBP14.03□□□□□ -0.16
HMGB2-205ENST00000511316 SEPT4O43236 478 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 SRGAP2O75044 1071 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 SERPING1P05155 500 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 HSD17B4P51659 736 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 GTF2A1P52655 376 aaPredicted RBP14.03□□□□□ -0.16
HMGB2-205ENST00000511316 TNNC1P63316 161 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 INF2Q27J81 1249 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 TMEM63BQ5T3F8 832 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 KDM7AQ6ZMT4 941 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 ARMCX2Q7L311 632 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 CACNA2D4Q7Z3S7 1137 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 BCAS4Q8TDM0 211 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 RRP36Q96EU6 259 aaKnown RBP14.03□□□□□ -0.16
HMGB2-205ENST00000511316 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.03□□□□□ -0.16
HMGB2-205ENST00000511316 PCDHA1Q9Y5I3 950 aa14.03□□□□□ -0.16
HMGB2-205ENST00000511316 GOLGA6L10A6NI86 522 aa14.02□□□□□ -0.16
HMGB2-205ENST00000511316 EDNRBP24530 442 aa14.02□□□□□ -0.16
HMGB2-205ENST00000511316 C2orf54Q08AI8 447 aa14.02□□□□□ -0.16
HMGB2-205ENST00000511316 PLCB4Q15147 1175 aa14.02□□□□□ -0.16
HMGB2-205ENST00000511316 CFAP58Q5T655 872 aa14.02□□□□□ -0.16
HMGB2-205ENST00000511316 PPP1R18Q6NYC8 613 aa14.02□□□□□ -0.16
HMGB2-205ENST00000511316 LRIG3Q6UXM1 1119 aa14.02□□□□□ -0.16
HMGB2-205ENST00000511316 RNF207Q6ZRF8 634 aa14.02□□□□□ -0.16
HMGB2-205ENST00000511316 HEATR3Q7Z4Q2 680 aa14.02□□□□□ -0.16
HMGB2-205ENST00000511316 SYTL5Q8TDW5 730 aaPredicted RBP14.02□□□□□ -0.16
HMGB2-205ENST00000511316 DIS3LQ8TF46 1054 aaKnown RBP14.02□□□□□ -0.16
HMGB2-205ENST00000511316 MAF1Q9H063 256 aa14.02□□□□□ -0.16
HMGB2-205ENST00000511316 GDF3Q9NR23 364 aa14.02□□□□□ -0.16
HMGB2-205ENST00000511316 BMP2KQ9NSY1 1161 aaPredicted RBP14.02□□□□□ -0.16
HMGB2-205ENST00000511316 DDX20Q9UHI6 824 aaKnown RBP14.02□□□□□ -0.16
HMGB2-205ENST00000511316 MCM3APO60318 1980 aa14.02□□□□□ -0.17
HMGB2-205ENST00000511316 PDE2AO00408 941 aaPredicted RBP14.01□□□□□ -0.17
HMGB2-205ENST00000511316 GNGT1P63211 74 aa14.01□□□□□ -0.17
HMGB2-205ENST00000511316 CUL1Q13616 776 aa14.01□□□□□ -0.17
HMGB2-205ENST00000511316 ACVR2BQ13705 512 aa14.01□□□□□ -0.17
HMGB2-205ENST00000511316 TYW1BQ6NUM6 668 aa14.01□□□□□ -0.17
HMGB2-205ENST00000511316 TAPT1Q6NXT6 567 aa14.01□□□□□ -0.17
HMGB2-205ENST00000511316 PDXDC1Q6P996 788 aa14.01□□□□□ -0.17
HMGB2-205ENST00000511316 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
HMGB2-205ENST00000511316 TAAR1Q96RJ0 339 aa14.01□□□□□ -0.17
HMGB2-205ENST00000511316 TMEM60Q9H2L4 133 aa14.01□□□□□ -0.17
HMGB2-205ENST00000511316 BZW2Q9Y6E2 419 aaKnown RBP14.01□□□□□ -0.17
HMGB2-205ENST00000511316 LAMA3Q16787 3333 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms