RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SKIP12755 728 aa11.74□□□□□ -0.53
DDX41-211ENST00000510171 USP11P51784 963 aa11.74□□□□□ -0.53
DDX41-211ENST00000510171 JAK3P52333 1124 aa11.74□□□□□ -0.53
DDX41-211ENST00000510171 POLGP54098 1239 aaPredicted RBP11.74□□□□□ -0.53
DDX41-211ENST00000510171 AKAP17AQ02040 695 aaKnown RBP11.74□□□□□ -0.53
DDX41-211ENST00000510171 GIT2Q14161 759 aa11.74□□□□□ -0.53
DDX41-211ENST00000510171 DDX53Q86TM3 631 aaKnown RBP11.74□□□□□ -0.53
DDX41-211ENST00000510171 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
DDX41-211ENST00000510171 TDRD5Q8NAT2 981 aaKnown RBP11.74□□□□□ -0.53
DDX41-211ENST00000510171 LENG9Q96B70 501 aa11.74□□□□□ -0.53
DDX41-211ENST00000510171 CCDC136Q96JN2 1154 aa11.74□□□□□ -0.53
DDX41-211ENST00000510171 DZANK1Q9NVP4 752 aa11.74□□□□□ -0.53
DDX41-211ENST00000510171 DBR1Q9UK59 544 aaKnown RBP11.74□□□□□ -0.53
DDX41-211ENST00000510171 MSH4O15457 936 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 CHMP2AO43633 222 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 ZC3H11AO75152 810 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDX41-211ENST00000510171 ASGR2P07307 311 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 GALTP07902 379 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 CTSAP10619 480 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 PHKA2P46019 1235 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 DNM2P50570 870 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 TARBP2Q15633 366 aaKnown RBP11.73□□□□□ -0.53
DDX41-211ENST00000510171 UGCGQ16739 394 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 ATG2AQ2TAZ0 1938 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
DDX41-211ENST00000510171 KIAA1841Q6NSI8 718 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 KANK3Q6NY19 840 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 GLB1LQ6UWU2 654 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 CABP7Q86V35 215 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 PPFIBP1Q86W92 1011 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 TMEM105Q8N8V8 129 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 SLC22A17Q8WUG5 538 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 TRAIPQ9BWF2 469 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 TEKT3Q9BXF9 490 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 NIFKQ9BYG3 293 aaKnown RBP11.73□□□□□ -0.53
DDX41-211ENST00000510171 INO80BQ9C086 356 aaPredicted RBP11.73□□□□□ -0.53
DDX41-211ENST00000510171 MFSD1Q9H3U5 465 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 SMOC2Q9H3U7 446 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 USTQ9Y2C2 406 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 IRAK3Q9Y616 596 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 C5orf42Q9H799 3197 aa11.73□□□□□ -0.53
DDX41-211ENST00000510171 A0A087WZ62 844 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 EDIL3O43854 480 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 CDC45O75419 566 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 EPCAMP16422 314 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 SFPQP23246 707 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX41-211ENST00000510171 CLCN5P51795 746 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 RNASELQ05823 741 aaKnown RBP11.72□□□□□ -0.53
DDX41-211ENST00000510171 DRP2Q13474 957 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 LONRF3Q496Y0 759 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 MTERF2Q49AM1 385 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 XKR3Q5GH77 459 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 NOMO2Q5JPE7 1267 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 LRCH2Q5VUJ6 765 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 TWF2Q6IBS0 349 aaKnown RBP11.72□□□□□ -0.53
DDX41-211ENST00000510171 Q6ZUG5 572 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 ASCL5Q7RTU5 278 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 CCDC148Q8NFR7 591 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 RDM1Q8NG50 284 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 AUTS2Q8WXX7 1259 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 SLC5A5Q92911 643 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 BRF1Q92994 677 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 LPPQ93052 612 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 PHKBQ93100 1093 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 IGSF21Q96ID5 467 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 FDXACB1Q9BRP7 624 aaPredicted RBP11.72□□□□□ -0.53
DDX41-211ENST00000510171 ZBP1Q9H171 429 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 UNC45AQ9H3U1 944 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 NRDE2Q9H7Z3 1164 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 CYP26B1Q9NR63 512 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
DDX41-211ENST00000510171 WDFY4Q6ZS81 3184 aa11.72□□□□□ -0.53
DDX41-211ENST00000510171 IGKV6-21A0A0C4DH24 114 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 ZNF623O75123 536 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 OFD1O75665 1012 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 CPA1P15085 419 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 NBL1P41271 181 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 TMC5Q6UXY8 1006 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 MIER3Q7Z3K6 550 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 TMEM173Q86WV6 379 aaPredicted RBP11.71□□□□□ -0.53
DDX41-211ENST00000510171 ACSF2Q96CM8 615 aaPredicted RBP11.71□□□□□ -0.53
DDX41-211ENST00000510171 PGBD4Q96DM1 585 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 SLC26A6Q9BXS9 759 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 EMILIN2Q9BXX0 1053 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 FAM105AQ9NUU6 356 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 TBC1D13Q9NVG8 400 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 SUCLA2Q9P2R7 463 aaPredicted RBP11.71□□□□□ -0.53
DDX41-211ENST00000510171 STK39Q9UEW8 545 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 INPP5FQ9Y2H2 1132 aa11.71□□□□□ -0.53
DDX41-211ENST00000510171 PLXNA4Q9HCM2 1894 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 SPDYE4A6NLX3 237 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 DDX11L8A8MPP1 907 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 PSMD10O75832 226 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 STBD1O95210 358 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 ALDH2P05091 517 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 KLRC2P26717 231 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 NLRP5P59047 1200 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 FOXK2Q01167 660 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 Q4G0T1 1027 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 BLOC1S2Q6QNY1 142 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms