RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 HOXA2O43364 376 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 FGF18O76093 207 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 FGFR1P11362 822 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 LAG3P18627 525 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 SFNP31947 248 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 MRE11P49959 708 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 NEK4P51957 841 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 NPEPPSP55786 919 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 C8orf34Q49A92 452 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 LRRC55Q6ZSA7 311 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 KSR1Q8IVT5 923 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 MAP7D2Q96T17 732 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 PHF7Q9BWX1 381 aaPredicted RBP12.26□□□□□ -0.45
RNF4-212ENST00000509258 NIFKQ9BYG3 293 aaKnown RBP12.26□□□□□ -0.45
RNF4-212ENST00000509258 ELAC1Q9H777 363 aaKnown RBP12.26□□□□□ -0.45
RNF4-212ENST00000509258 ATP6V0A4Q9HBG4 840 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 TMEM161AQ9NX61 479 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 TECTAO75443 2155 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 WDFY4Q6ZS81 3184 aa12.26□□□□□ -0.45
RNF4-212ENST00000509258 CDKL5O76039 1030 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 ZSCAN20P17040 1043 aaPredicted RBP12.25□□□□□ -0.45
RNF4-212ENST00000509258 ATF7P17544 494 aaPredicted RBP12.25□□□□□ -0.45
RNF4-212ENST00000509258 FAM189BP81408 668 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 PPP2R5CQ13362 524 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 CBX2Q14781 532 aaPredicted RBP12.25□□□□□ -0.45
RNF4-212ENST00000509258 DUSP6Q16828 381 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 TRIM67Q6ZTA4 783 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 BMP8AQ7Z5Y6 402 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 FAM177A1Q8N128 213 aaPredicted RBP12.25□□□□□ -0.45
RNF4-212ENST00000509258 COLGALT1Q8NBJ5 622 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 RDM1Q8NG50 284 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 CWH43Q9H720 699 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 NRBP2Q9NSY0 501 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 RGL1Q9NZL6 768 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 LZTS1Q9Y250 596 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 ZDBF2Q9HCK1 2354 aa12.25□□□□□ -0.45
RNF4-212ENST00000509258 DDX11L8A8MPP1 907 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 BTBD18B2RXH4 712 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 TDRD15B5MCY1 1934 aaKnown RBP12.24□□□□□ -0.45
RNF4-212ENST00000509258 PER2O15055 1255 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 CCNT1O60563 726 aaKnown RBP12.24□□□□□ -0.45
RNF4-212ENST00000509258 DARSP14868 501 aaKnown RBP12.24□□□□□ -0.45
RNF4-212ENST00000509258 EIF4BP23588 611 aaKnown RBP12.24□□□□□ -0.45
RNF4-212ENST00000509258 PPM1AP35813 382 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 GUCY1B3Q02153 619 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 TBC1D8BQ0IIM8 1120 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 TRIP11Q15643 1979 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 XKR3Q5GH77 459 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 CLLU1OSQ5K130 101 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 PPP4R3AQ6IN85 833 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 SUGP1Q8IWZ8 645 aaKnown RBP12.24□□□□□ -0.45
RNF4-212ENST00000509258 ABI1Q8IZP0 508 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 LRRC43Q8N309 656 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 TCF25Q9BQ70 676 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 TMEM117Q9H0C3 514 aa12.24□□□□□ -0.45
RNF4-212ENST00000509258 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
RNF4-212ENST00000509258 TYW1Q9NV66 732 aaKnown RBP12.24□□□□□ -0.45
RNF4-212ENST00000509258 PUF60Q9UHX1 559 aaKnown RBP12.24□□□□□ -0.45
RNF4-212ENST00000509258 A0A087WWV3 80 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 A0A087WZ62 844 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 TMEM221A6NGB7 291 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 MEIS3P2A8K0S8 358 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 M0R296 226 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 FSCN2O14926 492 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 MAFO75444 373 aaPredicted RBP12.23□□□□□ -0.45
RNF4-212ENST00000509258 KRT2P35908 639 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 PBX3P40426 434 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 ERVFC1P60507 584 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 PSMC5P62195 406 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 ZXDAP98168 799 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 RBM10P98175 930 aaKnown RBP12.23□□□□□ -0.45
RNF4-212ENST00000509258 CDC42EP1Q00587 391 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 PLCB3Q01970 1234 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 BMS1Q14692 1282 aaKnown RBP12.23□□□□□ -0.45
RNF4-212ENST00000509258 ANKRD1Q15327 319 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 PLPP4Q5VZY2 271 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 ECHDC2Q86YB7 292 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 VN1R2Q8NFZ6 395 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 SUSD6Q92537 303 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 MRPS27Q92552 414 aaKnown RBP12.23□□□□□ -0.45
RNF4-212ENST00000509258 PBXIP1Q96AQ6 731 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 DYDC2Q96IM9 177 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 RPGRIP1Q96KN7 1286 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 SCLT1Q96NL6 688 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 CASD1Q96PB1 797 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 PRRX2Q99811 253 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 FDXACB1Q9BRP7 624 aaPredicted RBP12.23□□□□□ -0.45
RNF4-212ENST00000509258 TMEM60Q9H2L4 133 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 NGRNQ9NPE2 291 aaKnown RBP12.23□□□□□ -0.45
RNF4-212ENST00000509258 ENTPD7Q9NQZ7 604 aa12.23□□□□□ -0.45
RNF4-212ENST00000509258 CARNS1A5YM72 827 aa12.22□□□□□ -0.45
RNF4-212ENST00000509258 GCFC2P16383 781 aaKnown RBP12.22□□□□□ -0.45
RNF4-212ENST00000509258 QARSP47897 775 aaKnown RBP12.22□□□□□ -0.45
RNF4-212ENST00000509258 CYP4A11Q02928 519 aa12.22□□□□□ -0.45
RNF4-212ENST00000509258 CTTNQ14247 550 aaKnown RBP12.22□□□□□ -0.45
RNF4-212ENST00000509258 NCAPH2Q6IBW4 605 aa12.22□□□□□ -0.45
RNF4-212ENST00000509258 TMEM184AQ6ZMB5 413 aa12.22□□□□□ -0.45
RNF4-212ENST00000509258 ZNF598Q86UK7 904 aaKnown RBP12.22□□□□□ -0.45
RNF4-212ENST00000509258 CCDC83Q8IWF9 413 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms